Gene: AT1G67960
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G67960
- Transcript Identifier AT1G67960.1
- Gene Type Coding gene
- Location Chr1 : 25480808-25484176 : negative
Gene Family Information
- ID HOM05D003836
- #Genes/#Species 181/91
- Phylogenetic origin
- ID ORTHO05D004556
- #Genes/#Species 177/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G67960.1
- symbol POD1
- full_name POLLEN DEFECTIVE IN GUIDANCE 1
- uniprot F4HVJ3
Descriptions
- Description POLLEN DEFECTIVE IN GUIDANCE-like protein
- Computational description CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009793 | IMP | Gene Ontology | embryo development ending in seed dormancy | 1 |
GO:0010183 | IMP | Gene Ontology | pollen tube guidance | 1 |
GO:0035437 | IMP IBA | Gene Ontology | maintenance of protein localization in endoplasmic reticulum | 1 2 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISM | Gene Ontology | nucleus | |
GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
GO:0005783 | IMP | Gene Ontology | endoplasmic reticulum | 1 |
GO:0005788 | IEA | GOA Database | endoplasmic reticulum lumen | |
GO:0005788 | IDA | Gene Ontology | endoplasmic reticulum lumen | 1 |
GO:0030176 | IBA | Gene Ontology | integral component of endoplasmic reticulum membrane | 2 |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR008010 | Tapt1 family |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |