Gene: AT1G62200
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G62200
- Transcript Identifier AT1G62200.2
- Gene Type Coding gene
- Location Chr1 : 22982147-22984334 : negative
Gene Family Information
- ID HOM05D000012
- #Genes/#Species 7816/98
- Phylogenetic origin
- ID ORTHO05D000567
- #Genes/#Species 780/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G62200.2
- symbol PTR6
- Alias AtNPF8.5,AtPTR6,NPF8.5,NRT1/ PTR family 8.5
- full_name peptide transporter 6
- uniprot Q93Z20
Descriptions
- Description Major facilitator superfamily protein
- Computational description Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8090 Blast hits to 7669 proteins in 1476 species: Archae - 0; Bacteria - 3978; Metazoa - 789; Fungi - 491; Plants - 2227; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006857 | IEA | Gene Ontology | oligopeptide transport | |
| GO:0055085 | IEA | Gene Ontology | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0022857 | IEA | Gene Ontology | transmembrane transporter activity | |
| GO:0022857 | IEA | InterPro | transmembrane transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009705 | IDA IBA | Gene Ontology | plant-type vacuole membrane | 1 2 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 24.2.2.9 | Solute transport.carrier-mediated transport.MFS superfamily.anion transporter (NRT1/PTR) |