Gene: AT1G56680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G56680
  • Transcript Identifier AT1G56680.2
  • Gene Type Coding gene
  • Location Chr1 : 21250428-21251486 : negative

Gene Family Information

  • ID HOM05D000242
  • #Genes/#Species 1731/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G56680.2
  • uniprot Q9FXB8

Descriptions

  • Description Chitinase family protein
  • Computational description Chitinase family protein; FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, sepal, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43600.1); Has 1945 Blast hits to 1934 proteins in 382 species: Archae - 0; Bacteria - 418; Metazoa - 15; Fungi - 16; Plants - 1444; Viruses - 3; Other Eukaryotes - 49 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006032
IEA
Gene Ontologychitin catabolic process
GO:0006032
IEA
InterProchitin catabolic process
GO:0016998
IEA
Gene Ontologycell wall macromolecule catabolic process
GO:0016998
IEA
InterProcell wall macromolecule catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004568
IBA
IEA
Gene Ontologychitinase activity1
GO:0004568
IEA
InterProchitinase activity
GO:0008061
IEA
GOA Databasechitin binding
GO:0008061
IEA
InterProchitin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023346 Lysozyme-like domain superfamily
IPR001002 Chitin-binding, type 1
IPR036861 Endochitinase-like superfamily
IPR016283 Glycoside hydrolase, family 19
IPR000726 Glycoside hydrolase, family 19, catalytic
Mapman id Description
35.1 not assigned.annotated