Gene: AT1G56540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G56540
  • Transcript Identifier AT1G56540.1
  • Gene Type Coding gene
  • Location Chr1 : 21181664-21185306 : positive

Gene Family Information

  • ID HOM05D000005
  • #Genes/#Species 11550/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G56540.1
  • uniprot Q19HX2

Descriptions

  • Description Disease resistance protein (TIR-NBS-LRR class) family
  • Computational description Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT1G56510.1); Has 17561 Blast hits to 13901 proteins in 601 species: Archae - 16; Bacteria - 1092; Metazoa - 852; Fungi - 62; Plants - 15154; Viruses - 4; Other Eukaryotes - 381 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006952
IEA
Gene Ontologydefense response
GO:0006952
IEA
InterProdefense response
GO:0007165
IEA
Gene Ontologysignal transduction
GO:0007165
IEA
InterProsignal transduction
GO:0002229
ISO
PLAZA Integrative Orthologydefense response to oomycetes AT1G56510
GO:0034644
ISO
PLAZA Integrative Orthologycellular response to UV AT1G56510
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT1G56510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003953
IEA
Gene OntologyNAD+ nucleosidase activity
GO:0003953
IEA
InterProNAD+ nucleosidase activity
GO:0043531
IEA
Gene OntologyADP binding
GO:0043531
IEA
InterProADP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G56510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR032675 Leucine-rich repeat domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
IPR044974 Disease resistance protein, plants
IPR042197 Apoptotic protease-activating factors, helical domain
IPR002182 NB-ARC
IPR003593 AAA+ ATPase domain
IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily
IPR011713 Leucine-rich repeat 3
Mapman id Description
26.9.2.1.1 External stimuli response.pathogen.effector-triggered immunity (ETI) network.TNL-mediated effector-triggered immunity.effector receptor (NLR)