Gene: AT1G56190
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G56190
- Transcript Identifier AT1G56190.1
- Gene Type Coding gene
- Location Chr1 : 21028403-21030454 : positive
Gene Family Information
- ID HOM05D001395
- #Genes/#Species 449/99
- Phylogenetic origin
- ID ORTHO05D002039
- #Genes/#Species 324/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G56190.1
- uniprot P50318
Descriptions
- Description Phosphoglycerate kinase family protein
- Computational description Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 10902 Blast hits to 10876 proteins in 3041 species: Archae - 254; Bacteria - 5279; Metazoa - 453; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4208 (source: NCBI BLink).
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Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006468 | IEA | GOA Database | protein phosphorylation | |
GO:0046686 | IEP | GOA Database | response to cadmium ion | |
GO:0046686 | IBA | Gene Ontology | response to cadmium ion | 1 |
GO:0006094 | IBA | Gene Ontology | gluconeogenesis | 1 |
GO:0016310 | IEA | GOA Database | phosphorylation | |
GO:0006096 | IMP IBA IEA | Gene Ontology | glycolytic process | 1 2 |
GO:0006096 | IEA | InterPro | glycolytic process | |
GO:0019253 | IEA | Gene Ontology | reductive pentose-phosphate cycle | |
GO:0050691 | IMP | Gene Ontology | regulation of defense response to virus by host | 3 |
GO:0010027 | IGI | Gene Ontology | thylakoid membrane organization | 4 |
GO:0019375 | IGI | Gene Ontology | galactolipid biosynthetic process | 4 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004618 | IBA IEA | Gene Ontology | phosphoglycerate kinase activity | 1 |
GO:0004618 | IEA | InterPro | phosphoglycerate kinase activity | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IBA | Gene Ontology | ATP binding | 1 |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0016740 | IEA | GOA Database | transferase activity | |
GO:0016301 | IEA | GOA Database | kinase activity | |
GO:0004672 | IDA | Gene Ontology | protein kinase activity | 2 |
GO:0043531 | IBA | Gene Ontology | ADP binding | 1 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009579 | IDA | GOA Database | thylakoid | |
GO:0009579 | HDA | Gene Ontology | thylakoid | 5 |
GO:0005829 | IBA, RCA | Gene Ontology | cytosol | 1 6 |
GO:0009507 | IDA IEA | GOA Database | chloroplast | |
GO:0009507 | HDA ISM | Gene Ontology | chloroplast | 7 |
GO:0009570 | IDA | GOA Database | chloroplast stroma | |
GO:0009570 | HDA | Gene Ontology | chloroplast stroma | 8 |
GO:0005739 | IDA | GOA Database | mitochondrion | |
GO:0005739 | HDA | Gene Ontology | mitochondrion | 9 |
GO:0009536 | IEA | GOA Database | plastid | |
GO:0009536 | IDA | Gene Ontology | plastid | 2 |
GO:0005634 | HDA | Gene Ontology | nucleus | 10 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |