Gene: AT1G56180
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G56180
- Transcript Identifier AT1G56180.1
- Gene Type Coding gene
- Location Chr1 : 21026243-21028047 : negative
Gene Family Information
- ID HOM05D007284
- #Genes/#Species 107/88
- Phylogenetic origin
- ID ORTHO05D009303
- #Genes/#Species 105/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G56180.1
- uniprot Q9C7J3
Descriptions
- Description ATP-dependent zinc metalloprotease
- Computational description unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048366 | IMP | Gene Ontology | leaf development | 1 |
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006508 | IEA | InterPro | proteolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004176 | IEA | Gene Ontology | ATP-dependent peptidase activity | |
| GO:0004176 | IEA | InterPro | ATP-dependent peptidase activity | |
| GO:0004222 | IEA | Gene Ontology | metalloendopeptidase activity | |
| GO:0004222 | IEA | InterPro | metalloendopeptidase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0008237 | IEA | GOA Database | metallopeptidase activity | |
| GO:0008233 | IEA | GOA Database | peptidase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IDA ISM | Gene Ontology | chloroplast | 1 |
| GO:0042651 | IDA | Gene Ontology | thylakoid membrane | 1 |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR037219 | Peptidase M41-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |