Gene: AT1G55260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G55260
  • Transcript Identifier AT1G55260.1
  • Gene Type Coding gene
  • Location Chr1 : 20614663-20616158 : positive

Gene Family Information

  • ID HOM05D001204
  • #Genes/#Species 518/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G55260.1
  • Alias LTPG6,glycosylphosphatidylinositol-anchored lipid protein transfer 6
  • uniprot F4I082

Descriptions

  • Description Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
  • Computational description Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: nucleus, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
IMP
Gene Ontologydefense response to fungus1
GO:0006952
IEA
GOA Databasedefense response

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031225
IEA
GOA Databaseanchored component of membrane
GO:0031225
TAS
Gene Ontologyanchored component of membrane2
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus3
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016140 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR043325 Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein
Mapman id Description
21.4.1.1.4 Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.arabinogalactan-protein activities.Xylogen-type arabinogalactan protein (XYP/XYLP)