Gene: AT1G54760

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G54760
  • Transcript Identifier AT1G54760.1
  • Gene Type Coding gene
  • Location Chr1 : 20433912-20434397 : positive

Gene Family Information

  • ID HOM05D000203
  • #Genes/#Species 1948/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G54760.1
  • symbol AGL85
  • uniprot Q9ZVL8

Descriptions

  • Description AGAMOUS-like 85
  • Computational description AGAMOUS-like 85 (AGL85); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 64 (TAIR:AT1G29962.1); Has 317 Blast hits to 317 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISS
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding3
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific3
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036879 Transcription factor, MADS-box superfamily
IPR002100 Transcription factor, MADS-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)