Gene: AT1G54710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G54710
  • Transcript Identifier AT1G54710.1
  • Gene Type Coding gene
  • Location Chr1 : 20417019-20420733 : negative

Gene Family Information

  • ID HOM05D001540
  • #Genes/#Species 414/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G54710.1
  • symbol ATG18H
  • Alias ATATG18H,homolog of yeast autophagy 18 (ATG18) H
  • full_name homolog of yeast autophagy 18 (ATG18) H
  • uniprot Q8H1Q5

Descriptions

  • Description autophagy 18h-like protein
  • Computational description homolog of yeast autophagy 18 (ATG18) H (ATG18H); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 852 Blast hits to 850 proteins in 188 species: Archae - 0; Bacteria - 4; Metazoa - 369; Fungi - 255; Plants - 157; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006914
IEA
Gene Ontologyautophagy
GO:0006914
IEA
InterProautophagy
GO:0042594
IEP
IBA
Gene Ontologyresponse to starvation1 2
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
IBA
Gene Ontologycytoplasm2
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0034045
IEA
GOA Databasephagophore assembly site membrane
GO:0005773
IEA
GOA Databasevacuole
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR045142 BCAS3-like
IPR001680 WD40 repeat
IPR022175 BCAS3 domain
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
19.3.3.5.1.3 Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG18