Gene: AT1G53860
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G53860
- Transcript Identifier AT1G53860.1
- Gene Type Coding gene
- Location Chr1 : 20107165-20109458 : negative
Gene Family Information
- ID HOM05D000276
- #Genes/#Species 1584/100
- Phylogenetic origin
- ID ORTHO05D006204
- #Genes/#Species 146/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G53860.1
- uniprot Q6DBE3
Descriptions
- Description Remorin family protein
- Computational description Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 458 Blast hits to 455 proteins in 58 species: Archae - 2; Bacteria - 9; Metazoa - 29; Fungi - 14; Plants - 379; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process | |
| GO:0051603 | ISO | PLAZA Homology (enrichment) | proteolysis involved in cellular protein catabolic process | HOM05D000276 |
| GO:0006511 | ISO | PLAZA Homology (enrichment) | ubiquitin-dependent protein catabolic process | HOM05D000276 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005575 | ND | Gene Ontology | cellular_component | |
| GO:0005839 | ISO | PLAZA Homology (enrichment) | proteasome core complex | HOM05D000276 |
| GO:0019773 | ISO | PLAZA Homology (enrichment) | proteasome core complex, alpha-subunit complex | HOM05D000276 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005516 | Remorin, C-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |