Gene: AT1G52910

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G52910
  • Transcript Identifier AT1G52910.1
  • Gene Type Coding gene
  • Location Chr1 : 19708114-19709128 : positive

Gene Family Information

  • ID HOM05D001019
  • #Genes/#Species 595/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G52910.1
  • uniprot Q9C930

Descriptions

  • Description fiber (DUF1218)
  • Computational description Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT3G15480.1); Has 528 Blast hits to 528 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 528; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009606 Modifying wall lignin-1/2
Mapman id Description
35.1 not assigned.annotated