Gene: AT1G51630
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G51630
- Transcript Identifier AT1G51630.1
- Gene Type Coding gene
- Location Chr1 : 19142141-19144082 : negative
Gene Family Information
- ID HOM05D002895
- #Genes/#Species 239/92
- Phylogenetic origin
- ID ORTHO05D003286
- #Genes/#Species 233/92
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G51630.1
- symbol MSR2
- Alias AtMSR2
- full_name Mannan Synthesis Related 2
- uniprot Q0WPA5
Descriptions
- Description O-fucosyltransferase family protein
- Computational description O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G21190.1); Has 751 Blast hits to 749 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 751; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071555 | IEA | GOA Database | cell wall organization | |
| GO:0006004 | IEA | GOA Database | fucose metabolic process | |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0097502 | IMP | Gene Ontology | mannosylation | 1 |
| GO:0052325 | IMP | Gene Ontology | cell wall pectin biosynthetic process | 1 |
| GO:0010412 | IMP | Gene Ontology | mannan metabolic process | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016757 | IEA | GOA Database | glycosyltransferase activity | |
| GO:0016757 | ISM | Gene Ontology | glycosyltransferase activity | 2 |
| GO:0051753 | IMP | Gene Ontology | mannan synthase activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | IDA, HDA | Gene Ontology | Golgi apparatus | 1 3 |
| GO:0005802 | IDA | GOA Database | trans-Golgi network | |
| GO:0005802 | HDA | Gene Ontology | trans-Golgi network | 2 |
| GO:0009505 | IDA | GOA Database | plant-type cell wall | |
| GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 4 |
| GO:0005768 | IDA | GOA Database | endosome | |
| GO:0005768 | HDA | Gene Ontology | endosome | 2 |
| GO:0005797 | HDA | Gene Ontology | Golgi medial cisterna | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.3.1.2 | Cell wall organisation.hemicellulose.heteromannan.biosynthesis.mannan biosynthesis accessory protein |