Gene: AT1G50670

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G50670
  • Transcript Identifier AT1G50670.1
  • Gene Type Coding gene
  • Location Chr1 : 18775086-18776552 : negative

Gene Family Information

  • ID HOM05D006187
  • #Genes/#Species 128/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G50670.1
  • Alias OTU2,ovarian tumor domain (OTU)-containing DUB (deubiquitilating enzyme) 2
  • uniprot Q9LPT6

Descriptions

  • Description OTU-like cysteine protease family protein
  • Computational description OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); Has 406 Blast hits to 406 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 136; Plants - 63; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030433
IEA
GOA Databaseubiquitin-dependent ERAD pathway
GO:0030433
IBA
Gene Ontologyubiquitin-dependent ERAD pathway1
GO:0030433
IEA
InterProubiquitin-dependent ERAD pathway
GO:0016579
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IBA
Gene Ontologyprotein deubiquitination1
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis
GO:0030968
IBA
Gene Ontologyendoplasmic reticulum unfolded protein response1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0101005
IEA
GOA Databasedeubiquitinase activity
GO:0101005
IEA
InterProdeubiquitinase activity
GO:0004843
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IBA
Gene Ontologythiol-dependent deubiquitinase1
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
HDA
Gene Ontologynucleus3
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
IBA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003323 OTU domain
IPR039138 Ubiquitin thioesterase OTU1/2/3
IPR038765 Papain-like cysteine peptidase superfamily
Mapman id Description
19.2.3.1.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU2)