Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 3.0e-119 431.8 209 100.0
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 9.1e-116 420.2 209 96.7
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 2.9e-114 415.2 209 95.7
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 1.4e-113 412.9 207 95.7
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 1.4e-113 412.9 209 94.7
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 9.4e-113 410.2 207 95.2
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 4.7e-112 407.9 207 94.7
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 1.4e-111 406.4 207 93.7
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 3.0e-111 405.2 208 94.2
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 3.9e-111 404.8 209 92.8
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 8.8e-111 403.7 209 92.3
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 5.7e-110 401.0 209 92.8
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 3.6e-104 381.7 209 86.6
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 1.8e-103 379.4 209 86.6
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 85.2
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 84.7
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 85.2
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 84.7
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 3.7e-101 371.7 209 83.7
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 83.3
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 83.7
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 82.8
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 85.6
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 83.7
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 83.7
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 83.7
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 83.3
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 83.3
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 83.3
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 85.2
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 83.3
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 7.0e-100 367.5 209 83.3
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 83.7
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 1.2e-99 366.7 209 81.3
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.2e-99 366.7 209 81.3
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 83.3
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 84.7
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 83.3
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 81.8
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 3.5e-99 365.2 209 83.3
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 3.5e-99 365.2 209 82.8
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 83.3
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 81.3
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 7.7e-99 364.0 209 82.3
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 81.3
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 83.3
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 80.4
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 83.3
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 81.3
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 81.8
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 81.3
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 83.3
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 79.9
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 81.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 79.9
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 5.5e-97 357.8 209 81.3
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 5.5e-97 357.8 209 81.3
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 7.2e-97 357.5 209 80.9
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 7.2e-97 357.5 209 80.9
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.2e-96 356.7 209 81.3
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.6e-96 356.3 208 78.8
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.6e-96 356.3 209 80.4
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 2.1e-96 355.9 209 79.9
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 2.1e-96 355.9 209 79.9
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.7e-96 355.5 209 80.9
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 3.6e-96 355.1 243 72.8
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 3.6e-96 355.1 209 78.9
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 3.6e-96 355.1 209 80.4
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.0e-95 353.6 221 77.8
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 4.0e-95 351.7 209 79.4
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 4.0e-95 351.7 208 78.8
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 6.7e-95 350.9 225 75.6
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 8.8e-95 350.5 209 79.4
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.2e-94 350.1 209 79.4
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.2e-94 350.1 209 78.5
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 7.5e-94 347.4 209 77.5
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 7.5e-94 347.4 230 74.8
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 9.7e-94 347.1 209 77.0
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.3e-93 346.7 209 77.5
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.8e-93 345.5 230 74.3
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 2.8e-93 345.5 209 78.9
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 1.4e-92 343.2 209 77.5
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.8e-92 342.8 240 71.7
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 9.1e-92 340.5 209 77.5
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 1.2e-91 340.1 209 77.0
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 1.1e-89 333.6 191 84.3
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 4.2e-89 331.6 187 85.6
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 9.4e-89 330.5 187 84.5
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.2e-88 330.1 209 75.6
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 2.7e-88 328.9 209 74.6
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 6.1e-88 327.8 190 80.5
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 1.0e-87 327.0 190 81.1
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 3.0e-87 325.5 206 72.3
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 5.2e-87 324.7 187 80.7
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 2.6e-86 322.4 288 59.7
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 3.4e-86 322.0 165 93.9
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 2.8e-85 318.9 193 79.3
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 6.3e-85 317.8 185 82.2
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 2.7e-83 312.4 209 69.9
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 7.7e-83 310.8 208 70.2
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 7.7e-83 310.8 208 67.8
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 2.3e-82 309.3 189 76.2
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 2.9e-82 308.9 209 71.3
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 4.1e-76 288.5 205 63.9
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 2.7e-75 285.8 211 69.2
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 3.6e-72 275.4 197 67.5
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 8.0e-72 274.2 165 77.0
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 4.1e-68 261.9 150 81.3
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.3e-66 256.9 204 60.8
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 4.7e-64 248.4 204 58.8
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 6.2e-64 248.1 209 63.2
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 3.1e-63 245.7 179 65.9
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 1.4e-60 236.9 210 55.2
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 5.4e-60 235.0 167 67.1
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.5e-57 226.9 135 78.5
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.7e-53 213.4 206 51.9
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 7.6e-46 188.0 206 47.1
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 9.9e-46 187.6 152 61.2
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 1.8e-39 166.8 207 38.2
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 4.9e-37 158.7 145 51.7
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 1.7e-34 150.2 149 54.4
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 3.9e-34 149.1 84 83.3
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 8.1e-32 141.4 84 78.6
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 8.1e-32 141.4 135 49.6
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 9.0e-31 137.9 127 57.5
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.4e-28 130.6 226 36.7
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 3.7e-24 115.9 74 74.3
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 2.8e-16 89.7 43 93.0
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 8.2e-16 88.2 76 59.2


User provided reference genes

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