Gene: AT1G50300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G50300
  • Transcript Identifier AT1G50300.2
  • Gene Type Coding gene
  • Location Chr1 : 18628818-18631282 : negative

Gene Family Information

  • ID HOM05D005264
  • #Genes/#Species 144/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G50300.2
  • symbol TAF15
  • uniprot Q9AST1

Descriptions

  • Description TBP-associated factor 15
  • Computational description TBP-associated factor 15 (TAF15); FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15B (TAIR:AT5G58470.2); Has 11021 Blast hits to 6677 proteins in 384 species: Archae - 8; Bacteria - 254; Metazoa - 5533; Fungi - 1360; Plants - 1875; Viruses - 14; Other Eukaryotes - 1977 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001876 Zinc finger, RanBP2-type
IPR036443 Zinc finger, RanBP2-type superfamily
Mapman id Description
15.3.4.2.10 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component TAF15