Gene: AT1G49015

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G49015
  • Transcript Identifier AT1G49015.1
  • Gene Type Coding gene
  • Location Chr1 : 18134528-18135312 : positive

Gene Family Information

  • ID HOM05D002708
  • #Genes/#Species 254/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G49015.1
  • uniprot F4I057

Descriptions

  • Description DPP6 N-terminal domain-like protein
  • Computational description DPP6 N-terminal domain-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 427 Blast hits to 427 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 167; Plants - 63; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006413
IBA
Gene Ontologytranslational initiation1
GO:0006413
IEA
InterProtranslational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031369
IEA
Gene Ontologytranslation initiation factor binding
GO:0031369
IEA
InterProtranslation initiation factor binding
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0003743
IBA
Gene Ontologytranslation initiation factor activity1
GO:0003743
IEA
InterProtranslation initiation factor activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D002708
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D002708

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005852
IEA
GOA Databaseeukaryotic translation initiation factor 3 complex
GO:0005852
IBA
Gene Ontologyeukaryotic translation initiation factor 3 complex1
GO:0005852
IEA
InterProeukaryotic translation initiation factor 3 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013979 Translation initiation factor, beta propellor-like domain
IPR011400 Eukaryotic translation initiation factor 3 subunit B
Mapman id Description
35.1 not assigned.annotated