Gene: AT1G31817

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G31817
  • Transcript Identifier AT1G31817.1
  • Gene Type Coding gene
  • Location Chr1 : 11414932-11416356 : negative

Gene Family Information

  • ID HOM05D006505
  • #Genes/#Species 123/83
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G31817.1
  • symbol NFD3
  • full_name NUCLEAR FUSION DEFECTIVE 3
  • uniprot Q8VZT8

Descriptions

  • Description Ribosomal L18p/L5e family protein
  • Computational description NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IBA
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation
GO:0000741
IEA
GOA Databasekaryogamy
GO:0000741
IMP
Gene Ontologykaryogamy2
GO:0000028
IBA
Gene Ontologyribosomal small subunit assembly1
GO:0000462
IBA
Gene Ontologymaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1
GO:0010197
IMP
Gene Ontologypolar nucleus fusion2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0070181
IBA
Gene Ontologysmall ribosomal subunit rRNA binding1
GO:0048027
IBA
Gene OntologymRNA 5'-UTR binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005763
IBA
Gene Ontologymitochondrial small ribosomal subunit1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001971 Ribosomal protein S11
IPR036967 Ribosomal protein S11 superfamily
Mapman id Description
17.7.1.2.9 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS11