Gene: AT1G29950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G29950
  • Transcript Identifier AT1G29950.1
  • Gene Type Coding gene
  • Location Chr1 : 10493461-10494216 : positive

Gene Family Information

  • ID HOM05D004468
  • #Genes/#Species 161/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G29950.1
  • uniprot Q9ASX9

Descriptions

  • Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  • Computational description basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G50010.1); Has 770 Blast hits to 729 proteins in 71 species: Archae - 0; Bacteria - 2; Metazoa - 29; Fungi - 28; Plants - 411; Viruses - 2; Other Eukaryotes - 298 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc02g070880.1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity2
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR037546 Transcription factor SAC51-like
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)