Gene: AT1G29170
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G29170
- Transcript Identifier AT1G29170.2
- Gene Type Coding gene
- Location Chr1 : 10190720-10194900 : negative
Gene Family Information
- ID HOM05D001720
- #Genes/#Species 376/94
- Phylogenetic origin
- ID ORTHO05D001813
- #Genes/#Species 351/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G29170.2
- symbol WAVE2
- uniprot Q9LP46
Descriptions
- Description SCAR family protein
- Computational description WAVE2; BEST Arabidopsis thaliana protein match is: SCAR family protein (TAIR:AT2G34150.2); Has 1242 Blast hits to 945 proteins in 214 species: Archae - 0; Bacteria - 272; Metazoa - 455; Fungi - 71; Plants - 226; Viruses - 5; Other Eukaryotes - 213 (source: NCBI BLink).
- Computational description WAVE2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of actin nucleation; LOCATED IN: SCAR complex; BEST Arabidopsis thaliana protein match is: SCAR family protein (TAIR:AT2G34150.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051127 | IMP | Gene Ontology | positive regulation of actin nucleation | 1 |
| GO:0030036 | IEA | GOA Database | actin cytoskeleton organization | |
| GO:0030036 | IBA | Gene Ontology | actin cytoskeleton organization | 2 |
| GO:0030036 | IEA | InterPro | actin cytoskeleton organization | |
| GO:2000601 | IBA | Gene Ontology | positive regulation of Arp2/3 complex-mediated actin nucleation | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0071933 | IBA | Gene Ontology | Arp2/3 complex binding | 2 |
| GO:0034237 | IBA | Gene Ontology | protein kinase A regulatory subunit binding | 2 |
| GO:0003779 | IEA | GOA Database | actin binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0031209 | TAS | Gene Ontology | SCAR complex | 1 |
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0005856 | IEA | InterPro | cytoskeleton |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR028288 | SCAR/WAVE family |
| Mapman id | Description |
|---|---|
| 20.2.2.2.4 | Cytoskeleton organisation.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.component SCAR |