Gene: AT1G22740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G22740
  • Transcript Identifier AT1G22740.1
  • Gene Type Coding gene
  • Location Chr1 : 8049247-8050494 : positive

Gene Family Information

  • ID HOM05D000726
  • #Genes/#Species 800/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G22740.1
  • symbol RABG3B
  • Alias ATRABG3B,RAB7,RAB75
  • full_name RAB GTPase homolog G3B
  • uniprot O04157

Descriptions

  • Description RAB GTPase homolog G3B
  • Computational description RAB GTPase homolog G3B (RABG3B); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3A (TAIR:AT4G09720.1); Has 25691 Blast hits to 25666 proteins in 724 species: Archae - 21; Bacteria - 135; Metazoa - 13533; Fungi - 3489; Plants - 2837; Viruses - 20; Other Eukaryotes - 5656 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:1905177
IMP
Gene Ontologytracheary element differentiation1
GO:0010623
IMP
Gene Ontologyprogrammed cell death involved in cell development1
GO:0010508
IMP
Gene Ontologypositive regulation of autophagy1
GO:0010089
IMP
Gene Ontologyxylem development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
ISS
Gene OntologyGTP binding2
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005774
IBA
Gene Ontologyvacuolar membrane4
GO:0016020
IEA
GOA Databasemembrane
GO:0005773
IDA
GOA Databasevacuole
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005634
HDA
Gene Ontologynucleus5
GO:0000325
HDA
Gene Ontologyplant-type vacuole6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
IPR001806 Small GTPase
Mapman id Description
22.3.4.1.7 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.G-class RAB GTPase