Gene: AT1G22700
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G22700
- Transcript Identifier AT1G22700.2
- Gene Type Coding gene
- Location Chr1 : 8028323-8029878 : negative
Gene Family Information
- ID HOM05D006403
- #Genes/#Species 124/94
- Phylogenetic origin
- ID ORTHO05D008130
- #Genes/#Species 123/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G22700.2
- uniprot B9DHG0
Descriptions
- Description Tetratricopeptide repeat (TPR)-like superfamily protein
- Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: photosystem I assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 4976 Blast hits to 3489 proteins in 588 species: Archae - 121; Bacteria - 1806; Metazoa - 382; Fungi - 139; Plants - 249; Viruses - 0; Other Eukaryotes - 2279 (source: NCBI BLink).
- Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: photosystem I assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 4973 Blast hits to 3484 proteins in 586 species: Archae - 121; Bacteria - 1802; Metazoa - 381; Fungi - 139; Plants - 249; Viruses - 0; Other Eukaryotes - 2281 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0048564 | IMP IBA | Gene Ontology | photosystem I assembly | 1 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009535 | IDA IEA | GOA Database | chloroplast thylakoid membrane | |
GO:0009535 | HDA IBA | Gene Ontology | chloroplast thylakoid membrane | 2 4 |
GO:0009579 | IEA | GOA Database | thylakoid | |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0016021 | IEA | GOA Database | integral component of membrane | |
GO:0009507 | IDA IEA | GOA Database | chloroplast | |
GO:0009507 | HDA | Gene Ontology | chloroplast | 5 |
GO:0009536 | IEA | GOA Database | plastid | |
GO:0005634 | HDA ISM | Gene Ontology | nucleus | 6 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
1.1.4.3.5 | Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PYG7) |