Gene: AT1G22700

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G22700
  • Transcript Identifier AT1G22700.2
  • Gene Type Coding gene
  • Location Chr1 : 8028323-8029878 : negative

Gene Family Information

  • ID HOM05D006403
  • #Genes/#Species 124/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G22700.2
  • uniprot B9DHG0

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: photosystem I assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 4976 Blast hits to 3489 proteins in 588 species: Archae - 121; Bacteria - 1806; Metazoa - 382; Fungi - 139; Plants - 249; Viruses - 0; Other Eukaryotes - 2279 (source: NCBI BLink).
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: photosystem I assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 4973 Blast hits to 3484 proteins in 586 species: Archae - 121; Bacteria - 1802; Metazoa - 381; Fungi - 139; Plants - 249; Viruses - 0; Other Eukaryotes - 2281 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048564
IMP
IBA
Gene Ontologyphotosystem I assembly1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009535
IDA
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
IBA
Gene Ontologychloroplast thylakoid membrane2 4
GO:0009579
IEA
GOA Databasethylakoid
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast5
GO:0009536
IEA
GOA Databaseplastid
GO:0005634
HDA
ISM
Gene Ontologynucleus6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR001440 Tetratricopeptide repeat 1
IPR019734 Tetratricopeptide repeat
Mapman id Description
1.1.4.3.5 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (PYG7)