Gene: AT1G17610
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G17610
- Transcript Identifier AT1G17610.1
- Gene Type Coding gene
- Location Chr1 : 6056895-6058157 : positive
Gene Family Information
- ID HOM05D000005
- #Genes/#Species 11550/84
- Phylogenetic origin
- ID ORTHO05D012587
- #Genes/#Species 21/10
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G17610.1
- Alias CHS1,CHILLING SENSITIVE 1
- uniprot F4I902
Descriptions
- Description Disease resistance protein (TIR-NBS class)
- Computational description Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS class) (TAIR:AT5G40090.1); Has 6872 Blast hits to 6811 proteins in 238 species: Archae - 0; Bacteria - 42; Metazoa - 2; Fungi - 5; Plants - 6813; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007165 | IEA | Gene Ontology | signal transduction | |
| GO:0007165 | IEA | InterPro | signal transduction | |
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0006952 | IEA | InterPro | defense response | |
| GO:0046713 | IMP | Gene Ontology | borate transport | 1 |
| GO:0009409 | IMP | Gene Ontology | response to cold |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003953 | IEA | GOA Database | NAD+ nucleosidase activity | |
| GO:0003953 | IEA | InterPro | NAD+ nucleosidase activity | |
| GO:0043531 | IEA | Gene Ontology | ADP binding | |
| GO:0043531 | IEA | InterPro | ADP binding | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0061809 | IEA | Gene Ontology | NAD+ nucleotidase, cyclic ADP-ribose generating | |
| GO:0050135 | IEA | Gene Ontology | NAD(P)+ nucleosidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044974 | Disease resistance protein, plants |
| IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily |
| IPR002182 | NB-ARC |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR042197 | Apoptotic protease-activating factors, helical domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |