Gene: AT1G17420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G17420
  • Transcript Identifier AT1G17420.1
  • Gene Type Coding gene
  • Location Chr1 : 5977512-5981384 : positive

Gene Family Information

  • ID HOM05D000208
  • #Genes/#Species 1933/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G17420.1
  • symbol LOX3
  • Alias ATLOX3,Arabidopsis thaliana lipoxygenase 3
  • uniprot Q9LNR3

Descriptions

  • Description lipoxygenase 3
  • Computational description lipoxygenase 3 (LOX3); FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: growth, response to fungus, jasmonic acid biosynthetic process, response to wounding, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1470 Blast hits to 1436 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 529; Fungi - 49; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034440
IDA
IBA
Gene Ontologylipid oxidation1 2
GO:0006633
IEA
GOA Databasefatty acid biosynthetic process
GO:0006631
IEA
GOA Databasefatty acid metabolic process
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0009611
IEP
TAS
Gene Ontologyresponse to wounding3 4
GO:0006952
TAS
Gene Ontologydefense response3
GO:0009695
TAS
Gene Ontologyjasmonic acid biosynthetic process5
GO:0080086
IGI
Gene Ontologystamen filament development6
GO:0048653
IGI
Gene Ontologyanther development6
GO:0009901
IGI
Gene Ontologyanther dehiscence6
GO:0009555
IGI
Gene Ontologypollen development6
GO:0009620
IEP
Gene Ontologyresponse to fungus7
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid8
GO:0009644
IEP
Gene Ontologyresponse to high light intensity9
GO:0031408
IEA
Gene Ontologyoxylipin biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0016702
IEA
GOA Databaseoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016702
IBA
Gene Ontologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2
GO:0016702
IEA
InterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0005515
IEA
InterProprotein binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0016165
IEA
GOA Databaselinoleate 13S-lipoxygenase activity
GO:0016165
IDA
Gene Ontologylinoleate 13S-lipoxygenase activity10

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001246 Lipoxygenase, plant
IPR027433 Lipoxygenase, domain 3
IPR001024 PLAT/LH2 domain
IPR036392 PLAT/LH2 domain superfamily
IPR036226 Lipoxigenase, C-terminal domain superfamily
IPR042057 Plant lipoxygenase, PLAT/LH2 domain
IPR000907 Lipoxygenase
IPR013819 Lipoxygenase, C-terminal
Mapman id Description
11.7.1.2 Phytohormone action.jasmonic acid.biosynthesis.13-lipoxygenase (LOX)