Gene: AT1G16290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G16290
  • Transcript Identifier AT1G16290.2
  • Gene Type Coding gene
  • Location Chr1 : 5570938-5573565 : negative

Gene Family Information

  • ID HOM05D005601
  • #Genes/#Species 137/83
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G16290.2
  • uniprot A1L4W6

Descriptions

  • Description transglycosylase
  • Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic transglycosylase-like, catalytic (InterPro:IPR008258); Has 171 Blast hits to 155 proteins in 40 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008258 Transglycosylase SLT domain 1
IPR023346 Lysozyme-like domain superfamily
Mapman id Description
35.1 not assigned.annotated