Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.4e-256 889.0 429 100.0
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 6.4e-249 863.6 429 96.5
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 4.1e-248 860.9 429 95.6
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 2.1e-231 805.4 430 88.8
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 2.1e-231 805.4 430 88.8
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 4.6e-231 804.3 420 90.7
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 6.0e-231 803.9 430 88.6
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 6.6e-230 800.4 430 87.9
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.1e-229 799.7 430 88.1
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.1e-229 799.7 430 88.1
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 1.5e-226 789.3 420 88.6
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 4.4e-226 787.7 430 86.5
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 9.2e-224 780.0 420 88.3
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.2e-191 673.3 462 69.7
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.7e-169 599.7 435 64.1
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 6.7e-166 587.8 425 65.2
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 1.1e-165 587.0 456 61.2
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 3.7e-164 582.0 425 64.2
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 3.7e-164 582.0 425 64.0
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 1.4e-163 580.1 426 63.8
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 2.6e-162 575.9 423 62.6
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 2.2e-161 572.8 425 63.1
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 5.0e-161 571.6 431 62.6
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 5.5e-160 568.2 421 63.4
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 9.4e-160 567.4 426 62.2
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.7e-159 565.8 423 62.9
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 2.7e-159 565.8 435 62.1
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 4.7e-159 565.1 423 62.6
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 4.7e-159 565.1 411 64.2
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 4.0e-158 562.0 423 61.9
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 8.8e-158 560.8 431 61.0
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 2.0e-157 559.7 430 61.6
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 3.3e-157 558.9 423 62.4
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 3.1e-155 552.4 440 60.5
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 5.3e-155 551.6 427 62.1
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 7.0e-155 551.2 418 61.5
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 9.1e-155 550.8 419 61.6
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.2e-154 550.4 440 60.2
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.6e-154 550.1 422 60.2
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 4.5e-154 548.5 433 59.8
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 7.7e-154 547.7 417 61.9
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 7.7e-154 547.7 441 58.3
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.0e-153 547.4 421 61.5
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 2.9e-153 545.8 424 61.8
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 2.9e-153 545.8 419 61.3
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 8.5e-153 544.3 412 62.6
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 1.1e-152 543.9 427 60.2
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 1.1e-152 543.9 422 61.4
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 7.2e-152 541.2 428 60.7
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 3.6e-151 538.9 434 59.4
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 1.8e-150 536.6 489 54.0
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 3.0e-150 535.8 432 60.2
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.0e-149 533.1 422 60.7
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 3.4e-149 532.3 425 59.5
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 1.7e-148 530.0 437 58.4
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 2.2e-148 529.6 418 59.8
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 2.8e-148 529.3 481 54.1
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.1e-147 527.3 453 57.4
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 3.1e-147 525.8 421 58.7
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 5.4e-147 525.0 424 57.5
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.7e-146 522.7 421 58.4
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 5.9e-146 521.5 420 58.3
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 1.3e-145 520.4 464 55.2
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 8.6e-145 517.7 423 59.1
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 5.5e-144 515.0 423 58.4
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.6e-143 513.5 414 59.4
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 2.8e-143 512.7 432 57.4
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 2.4e-139 499.6 431 56.6
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 5.9e-138 495.0 426 57.7
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.3e-137 493.8 371 62.0
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 4.3e-136 488.8 443 54.6
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.6e-135 486.9 429 55.0
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 1.7e-129 466.8 435 52.4
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.5e-128 463.8 421 53.0
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 8.9e-126 454.5 426 53.1
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 2.0e-125 453.4 457 53.6
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 2.9e-124 449.5 424 53.3
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 7.0e-123 444.9 383 55.9
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.0e-121 439.5 426 51.9
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 5.6e-120 435.3 347 61.4
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 9.5e-120 434.5 352 59.1
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 1.1e-118 431.0 345 59.4
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.3e-116 424.1 400 51.0
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 4.9e-116 422.2 422 49.8
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 4.9e-116 422.2 422 49.8
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.3e-113 414.1 334 59.6
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.5e-112 410.6 430 45.3
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 2.3e-105 386.7 450 42.7
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 2.5e-96 356.7 426 40.4
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 1.4e-94 350.9 416 40.6
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 1.7e-92 344.0 485 37.7
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 2.5e-80 303.5 212 65.1
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 5.8e-77 292.4 251 55.8
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.4e-75 287.7 387 37.7
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 4.6e-74 282.7 216 60.6
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 3.6e-66 256.5 179 65.4
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.7e-60 237.7 186 56.5
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.8e-57 227.6 186 53.2
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 3.5e-53 213.4 185 55.7
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 4.4e-48 196.4 153 58.8
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 2.7e-42 177.2 146 59.6
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 8.0e-42 175.6 146 59.6
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 1.0e-41 175.3 145 60.0
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-41 174.9 146 59.6
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.2e-40 171.8 147 49.7
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 6.3e-39 166.0 157 51.0
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 5.4e-38 162.9 123 59.3
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 2.0e-37 161.0 125 64.0
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 5.0e-36 156.4 120 57.5
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 9.4e-35 152.1 106 64.2
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 2.1e-34 151.0 99 69.7
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 8.0e-34 149.1 115 57.4
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.0e-33 147.1 115 57.4
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 3.8e-28 130.2 112 56.2
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 4.2e-27 126.7 83 67.5
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 5.7e-24 116.3 124 48.4
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 8.3e-23 112.5 81 59.3
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.8e-22 111.3 123 46.3
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 7.8e-21 105.9 88 56.8
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 7.8e-21 105.9 113 50.4
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.3e-20 105.1 112 42.0
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.7e-20 104.8 69 66.7
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.9e-20 104.0 88 54.5
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 1.1e-19 102.1 59 72.9
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 2.5e-19 100.9 111 50.5
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 1.3e-15 88.6 102 48.0
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 6.4e-15 86.3 102 47.1
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 1.1e-14 85.5 130 32.3
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.6e-13 81.6 54 66.7
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.6e-13 81.6 63 61.9
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 7.8e-13 79.3 48 75.0
C05p13980 Brassica napus HOM05D000840 ORTHO05D000670 6.2e-10 69.7 125 41.6
BolC1t03288H Brassica oleracea HOM05D032251 ORTHO05D042368 8.1e-10 69.3 106 42.5
C03p78480 Brassica napus HOM05D032251 ORTHO05D097000 1.4e-09 68.6 99 43.4
C05p21110 Brassica napus HOM05D032251 ORTHO05D042368 3.1e-09 67.4 123 38.2
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 1.2e-08 65.5 58 51.7
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 1.4e-06 58.5 42 61.9
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.9e-06 58.2 37 62.2


User provided reference genes

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