Gene: AT1G13340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G13340
  • Transcript Identifier AT1G13340.1
  • Gene Type Coding gene
  • Location Chr1 : 4569622-4571043 : negative

Gene Family Information

  • ID HOM05D000325
  • #Genes/#Species 1421/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G13340.1
  • uniprot Q9FX63

Descriptions

  • Description Regulator of Vps4 activity in the MVB pathway protein
  • Computational description Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 628 Blast hits to 628 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 130; Plants - 284; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
Gene Ontologyprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0006979
IMP
Gene Ontologyresponse to oxidative stress1
GO:0008104
IBA
Gene Ontologyprotein localization2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005061 Vacuolar protein sorting-associated protein Ist1
IPR042277 Vacuolar protein sorting-associated protein IST1-like
Mapman id Description
22.4.1.5 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-regulatory factor (ISTL)