Gene: AT1G12250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G12250
  • Transcript Identifier AT1G12250.1
  • Gene Type Coding gene
  • Location Chr1 : 4159287-4161269 : positive

Gene Family Information

  • ID HOM05D007062
  • #Genes/#Species 113/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G12250.1
  • uniprot Q8H1Q1

Descriptions

  • Description Pentapeptide repeat-containing protein
  • Computational description Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7687 Blast hits to 4280 proteins in 513 species: Archae - 134; Bacteria - 5724; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1589 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
HDA
ISM
Gene Ontologyextracellular region1
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid2
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast3
GO:0009536
IEA
GOA Databaseplastid
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid4
GO:0009535
IDA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane2
GO:0009543
IEA
GOA Databasechloroplast thylakoid lumen
GO:0009543
IDA
Gene Ontologychloroplast thylakoid lumen5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001646 Pentapeptide repeat
Mapman id Description
35.1 not assigned.annotated