Gene: AT1G11980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G11980
  • Transcript Identifier AT1G11980.1
  • Gene Type Coding gene
  • Location Chr1 : 4045619-4045855 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G11980.1
  • symbol RUB3
  • uniprot O65381

Descriptions

  • Description ubiquitin-related protein 3
  • Computational description ubiquitin-related protein 3 (RUB3); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: related to ubiquitin 1 (TAIR:AT1G31340.1); Has 10783 Blast hits to 5743 proteins in 691 species: Archae - 0; Bacteria - 14; Metazoa - 4770; Fungi - 1304; Plants - 2605; Viruses - 173; Other Eukaryotes - 1917 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
Gene Ontologyprotein ubiquitination1
GO:0019941
IBA
Gene Ontologymodification-dependent protein catabolic process1
GO:0030162
IBA
Gene Ontologyregulation of proteolysis1
GO:0045116
IBA
Gene Ontologyprotein neddylation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IBA
Gene Ontologyubiquitin protein ligase binding1
GO:0031386
IBA
Gene Ontologyprotein tag1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005634
IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000626 Ubiquitin-like domain
IPR038738 Nedd8-like ubiquitin
IPR029071 Ubiquitin-like domain superfamily
IPR019956 Ubiquitin domain
Mapman id Description
35.1 not assigned.annotated