Gene: AT1G09070
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G09070
- Transcript Identifier AT1G09070.1
- Gene Type Coding gene
- Location Chr1 : 2927767-2928741 : positive
Gene Family Information
- ID HOM05D000865
- #Genes/#Species 692/92
- Phylogenetic origin
- ID ORTHO05D000739
- #Genes/#Species 641/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G09070.1
- symbol SRC2
- Alias (AT)SRC2,SOYBEAN GENE REGULATED BY COLD-2,AtSRC2
- uniprot O04023
Descriptions
- Description soybean gene regulated by cold-2
- Computational description soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006952 | IEA | Gene Ontology | defense response | |
| GO:0006952 | IEA | InterPro | defense response | |
| GO:0071456 | HEP | Gene Ontology | cellular response to hypoxia | 1 |
| GO:0006623 | TAS | Gene Ontology | protein targeting to vacuole | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | IDA IEA | GOA Database | plasma membrane | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 3 |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | IDA | Gene Ontology | endoplasmic reticulum | 2 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005773 | IEA | GOA Database | vacuole | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0032586 | IEA | GOA Database | protein storage vacuole membrane | |
| GO:0005576 | HDA | Gene Ontology | extracellular region | 4 |
| GO:0000326 | IDA | Gene Ontology | protein storage vacuole | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |