Gene: AT1G07890
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G07890
- Transcript Identifier AT1G07890.1
- Gene Type Coding gene
- Location Chr1 : 2438005-2439435 : positive
Gene Family Information
- ID HOM05D000646
- #Genes/#Species 882/99
- Phylogenetic origin
- ID ORTHO05D000607
- #Genes/#Species 744/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G07890.1
- symbol APX1
- Alias ATAPX01,ATAPX1,CS1,MEE6,maternal effect embryo arrest 6
- uniprot Q05431
Descriptions
- Description ascorbate peroxidase 1
- Computational description ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, cell wall, chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 8811 Blast hits to 8057 proteins in 1265 species: Archae - 75; Bacteria - 2912; Metazoa - 21; Fungi - 794; Plants - 3291; Viruses - 0; Other Eukaryotes - 1718 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042744 | IEA | GOA Database | hydrogen peroxide catabolic process | |
GO:0042744 | IMP IBA | Gene Ontology | hydrogen peroxide catabolic process | 1 2 |
GO:0034599 | IBA IEA | Gene Ontology | cellular response to oxidative stress | 2 |
GO:0034599 | IEA | InterPro | cellular response to oxidative stress | |
GO:0000302 | IMP IBA | Gene Ontology | response to reactive oxygen species | 1 2 |
GO:0098869 | IEA | GOA Database | cellular oxidant detoxification | |
GO:0046686 | IEP | GOA Database | response to cadmium ion | |
GO:0009408 | IEP | Gene Ontology | response to heat | 3 |
GO:0006979 | IEA | GOA Database | response to oxidative stress | |
GO:0006979 | IEA | InterPro | response to oxidative stress | |
GO:0009793 | IMP | Gene Ontology | embryo development ending in seed dormancy | 4 |
GO:0009699 | IMP | Gene Ontology | phenylpropanoid biosynthetic process | 5 |
GO:0009809 | IDA, IMP, IGI, IEP | Gene Ontology | lignin biosynthetic process | 5 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004601 | IEA | GOA Database | peroxidase activity | |
GO:0004601 | IBA | Gene Ontology | peroxidase activity | 2 |
GO:0004601 | IEA | InterPro | peroxidase activity | |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
GO:0020037 | IEA | Gene Ontology | heme binding | |
GO:0020037 | IEA | InterPro | heme binding | |
GO:0016688 | IMP TAS, IEA | Gene Ontology | L-ascorbate peroxidase activity | 1 6 |
GO:0005515 | IPI | Gene Ontology | protein binding | 7 |
GO:0046409 | IDA | Gene Ontology | p-coumarate 3-hydroxylase activity | 5 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | IDA | GOA Database | chloroplast | |
GO:0009507 | HDA IBA | Gene Ontology | chloroplast | 2 8 |
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | ISM | Gene Ontology | cytoplasm | |
GO:0005618 | IDA | GOA Database | cell wall | |
GO:0005794 | IDA | GOA Database | Golgi apparatus | |
GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 9 |
GO:0009570 | IDA | GOA Database | chloroplast stroma | |
GO:0009570 | HDA | Gene Ontology | chloroplast stroma | 10 |
GO:0005886 | IDA | GOA Database | plasma membrane | |
GO:0005886 | HDA | Gene Ontology | plasma membrane | 11 |
GO:0005829 | IDA | GOA Database | cytosol | |
GO:0005829 | HDA TAS | Gene Ontology | cytosol | 12 13 |
GO:0009506 | IDA | GOA Database | plasmodesma | |
GO:0009506 | HDA | Gene Ontology | plasmodesma | 14 |
GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 15 |
GO:0005576 | HDA | Gene Ontology | extracellular region | 16 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
10.5.1 | Redox homeostasis.ascorbate-based redox regulation.ascorbate peroxidase (APX) |