Gene: AT1G02130

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G02130
  • Transcript Identifier AT1G02130.1
  • Gene Type Coding gene
  • Location Chr1 : 400350-401788 : negative

Gene Family Information

  • ID HOM05D000255
  • #Genes/#Species 1677/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G02130.1
  • symbol RA-5
  • Alias ARA-5,RAS 5,ARA5,ARABIDOPSIS RAS 5,ATRAB1B,ARABIDOPSIS THALIANA RESPONSIVE TO ABSCISIC ACID 1B,ATRABD2A,ARABIDOPSIS THALIANA RAB D2A,RABD2A,RAB D2A
  • uniprot P28188

Descriptions

  • Description RAS 5
  • Computational description RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006888
IDA, IMP
Gene Ontologyendoplasmic reticulum to Golgi vesicle-mediated transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane2
GO:0005773
IDA
GOA Databasevacuole
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0000139
IDA
Gene OntologyGolgi membrane3
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005576
HDA
Gene Ontologyextracellular region4
GO:0032588
IDA
Gene Ontologytrans-Golgi network membrane3
GO:0000325
HDA
Gene Ontologyplant-type vacuole5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.4 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.D-class RAB GTPase