Gene: AL5G45980

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL5G45980
  • Transcript Identifier AL5G45980.t1
  • Gene Type Coding gene
  • Location scaffold_5 : 21057639-21059255 : negative

Gene Family Information

  • ID HOM05D002543
  • #Genes/#Species 266/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL5G45980.v2.1
  • synonym 486816
  • synonym fgenesh2_kg.5__2808__AT3G63140.1
  • pacid 35919575

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045727
ISO
PLAZA Integrative Orthologypositive regulation of translation AT3G63140
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT3G63140
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G63140
GO:0032544
ISO
PLAZA Integrative Orthologyplastid translation AT3G63140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008266
ISO
PLAZA Integrative Orthologypoly(U) RNA binding AT3G63140
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G63140
GO:0003824
ISO
PLAZA Homology (enrichment)catalytic activity HOM05D002543
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G63140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G63140
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G63140
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G63140
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G63140
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G63140
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G63140
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule AT3G63140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
16.11.1.5 RNA processing.organelle machinery.ribonuclease activities.endoribonuclease (CSP41)