Gene: AL5G11960

General Information

Structural Information

Species Arabidopsis lyrata
Gene Identifier AL5G11960
Transcript Identifier AL5G11960.t1
Gene Type Coding gene
Location scaffold_5 : 998360-999300 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000050
#Genes/#Species 4474/100
Phylogenetic origin

ID ORTHO05D000654
#Genes/#Species 707/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AL5G11960.v2.1
synonym fgenesh2_kg.5__175__AT2G02760.1
pacid 35920788

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009650	ISO	PLAZA Integrative Orthology	UV protection	AT2G02760
GO:0010228	ISO	PLAZA Integrative Orthology	vegetative to reproductive phase transition of meristem	AT2G02760
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT2G02760
GO:0033523	ISO	PLAZA Integrative Orthology	histone H2B ubiquitination	AT2G02760

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT2G02760

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G02760

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000608	Ubiquitin-conjugating enzyme E2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like

Mapman id	Description
19.2.2.1.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)