Gene: AL2G38970

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL2G38970
  • Transcript Identifier AL2G38970.t1
  • Gene Type Coding gene
  • Location scaffold_2 : 18267930-18270036 : positive

Gene Family Information

  • ID HOM05D001036
  • #Genes/#Species 585/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL2G38970.v2.1
  • synonym 477021
  • synonym fgenesh2_kg.2__2151__AT1G78570.1
  • pacid 35945338

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009225
IEA
InterPronucleotide-sugar metabolic process
GO:0051555
ISO
PLAZA Integrative Orthologyflavonol biosynthetic process AT1G78570
GO:0010253
ISO
PLAZA Integrative OrthologyUDP-rhamnose biosynthetic process AT1G78570
GO:0030154
ISO
PLAZA Integrative Orthologycell differentiation AT1G78570
GO:0010315
ISO
PLAZA Integrative Orthologyauxin efflux AT1G78570
GO:0042127
ISO
PLAZA Integrative Orthologyregulation of cell population proliferation AT1G78570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008460
IEA
InterProdTDP-glucose 4,6-dehydratase activity
GO:0050377
ISO
PLAZA Integrative OrthologyUDP-glucose 4,6-dehydratase activity AT1G78570
GO:0010280
ISO
PLAZA Integrative OrthologyUDP-L-rhamnose synthase activity AT1G78570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G78570
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G78570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR005888 dTDP-glucose 4,6-dehydratase
IPR036291 NAD(P)-binding domain superfamily
IPR029903 RmlD-like substrate binding domain
Mapman id Description
3.13.6.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.nucleotide rhamnose biosynthesis.UDP-L-rhamnose synthase (RHM)