Gene: AL1G62050
General Information
Structural Information
- Species Arabidopsis lyrata
- Gene Identifier AL1G62050
- Transcript Identifier AL1G62050.t1
- Gene Type Coding gene
- Location scaffold_1 : 28577532-28579612 : negative
Gene Family Information
- ID HOM05D001036
- #Genes/#Species 585/99
- Phylogenetic origin
- ID ORTHO05D001852
- #Genes/#Species 346/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id AL1G62050.v2.1
- synonym 474478
- synonym fgenesh2_kg.1__4432__AT1G53500.1
- pacid 35932325
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009225 | IEA | InterPro | nucleotide-sugar metabolic process | |
| GO:0010253 | ISO | PLAZA Integrative Orthology | UDP-rhamnose biosynthetic process | AT1G53500 |
| GO:0010192 | ISO | PLAZA Integrative Orthology | mucilage biosynthetic process | AT1G53500 |
| GO:0010214 | ISO | PLAZA Integrative Orthology | seed coat development | AT1G53500 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008460 | IEA | InterPro | dTDP-glucose 4,6-dehydratase activity | |
| GO:0050377 | ISO | PLAZA Integrative Orthology | UDP-glucose 4,6-dehydratase activity | AT1G53500 |
| GO:0010280 | ISO | PLAZA Integrative Orthology | UDP-L-rhamnose synthase activity | AT1G53500 |
| GO:0010490 | ISO | PLAZA Integrative Orthology | UDP-4-keto-rhamnose-4-keto-reductase activity | AT1G53500 |
| GO:0010489 | ISO | PLAZA Integrative Orthology | UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity | AT1G53500 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G53500 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 3.13.6.1 | Carbohydrate metabolism.nucleotide sugar biosynthesis.nucleotide rhamnose biosynthesis.UDP-L-rhamnose synthase (RHM) |