Gene: A06p08340
General Information
Structural Information
- Species Brassica napus
- Gene Identifier A06p08340
- Transcript Identifier A06p08340
- Gene Type Coding gene
- Location A06 : 4606701-4614828 : positive
Gene Family Information
- ID HOM05D004784
- #Genes/#Species 154/100
- Phylogenetic origin
- ID ORTHO05D005762
- #Genes/#Species 152/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid A06p08340.1_BnaDAR
- v5 BnaA06g07360D
- single_cell_id A06p08340.1-BnaDAR
- ensembl GSBRNA2T00105341001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009094 | IEA | InterPro | L-phenylalanine biosynthetic process | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G11860 |
| GO:0006546 | ISO | PLAZA Homology (enrichment) | glycine catabolic process | HOM05D004784 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004664 | IEA | InterPro | prephenate dehydratase activity | |
| GO:0004462 | IEA | InterPro | lactoylglutathione lyase activity | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G11860 |
| GO:0004047 | ISO | PLAZA Homology (enrichment) | aminomethyltransferase activity | HOM05D004784 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G11860 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G11860 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT1G11860 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G11860 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT1G11860 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT1G11860 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT1G11860 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029043 | Glycine cleavage T-protein/YgfZ, C-terminal |
| IPR006222 | Aminomethyltransferase, folate-binding domain |
| IPR029068 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| IPR001086 | Prephenate dehydratase |
| IPR013977 | Glycine cleavage T-protein, C-terminal barrel domain |
| IPR004361 | Glyoxalase I |
| IPR027266 | GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 |
| IPR004360 | Glyoxalase/fosfomycin resistance/dioxygenase domain |