Gene: A03p19950
General Information
Structural Information
- Species Brassica napus
- Gene Identifier A03p19950
- Transcript Identifier A03p19950
- Gene Type Coding gene
- Location A03 : 8801465-8803979 : positive
Gene Family Information
- ID HOM05D000972
- #Genes/#Species 617/100
- Phylogenetic origin
- ID ORTHO05D001783
- #Genes/#Species 356/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid A03p19950.1_BnaDAR
- v5 BnaA03g16530D
- single_cell_id A03p19950.1-BnaDAR
- ensembl GSBRNA2T00141833001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G36160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G36160 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT2G36160 |
| GO:0022627 | ISO | PLAZA Integrative Orthology | cytosolic small ribosomal subunit | AT2G36160 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G36160 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G36160 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G11510 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G36160 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT2G36160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001975 | Ribosomal protein L40e |
| IPR019956 | Ubiquitin domain |
| IPR000626 | Ubiquitin-like domain |
| IPR011332 | Zinc-binding ribosomal protein |
| IPR001971 | Ribosomal protein S11 |
| IPR036967 | Ribosomal protein S11 superfamily |
| IPR029071 | Ubiquitin-like domain superfamily |
| IPR038587 | Ribosomal protein L40e superfamily |
| Mapman id | Description |
|---|---|
| 17.1.2.1.43 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL40 |
| 17.1.3.1.15 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS14 |