Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Thecc.01G153400 Ribosomal L5P family protein Chromosome_1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G7300 LG-9 + View
Acer truncatum Atru.chr6.2764 chr6 - View
Acer truncatum Atru.chr10.1590 chr10 - View
Actinidia chinensis Actinidia10948 Lachesis_group19 - View
Actinidia chinensis Actinidia39517 Lachesis_group17 + View
Arabidopsis lyrata AL8G12820 scaffold_8 + View
Avicennia marina MSTRG.6782 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.15084 ScioBoG_19538_HRSCAF_19626 - View
Aquilegia oxysepala Aqoxy1G02003 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QQZY3Q K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YL4K0N K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT4G18730 ribosomal protein L16B encodes a cytosolic ribosomal protein L16%2C which is a constituent of 60S large ribosomal complex. Gene is expressed in root and shoot apical meristems and in lateral root primordia. Expression in lateral root primordia is induced by auxin. ribosomal protein L16B (RPL16B)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: lateral root morphogenesis%2C cell cycle%2C translation%3B LOCATED IN: cytosolic large ribosomal subunit%2C vacuole%2C membrane%3B EXPRESSED IN: lateral root primordium%2C leaf%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132)%2C Ribosomal protein L5%2C conserved site (InterPro:IPR020929)%2C Ribosomal protein L5%2C N-terminal (InterPro:IPR020927)%2C Ribosomal protein L5%2C C-terminal (InterPro:IPR020928)%3B BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G45775 Ribosomal L5P family protein Ribosomal L5P family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic large ribosomal subunit%2C vacuole%3B EXPRESSED IN: male gametophyte%2C leaf%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132)%2C Ribosomal protein L5%2C conserved site (InterPro:IPR020929)%2C Ribosomal protein L5%2C C-terminal (InterPro:IPR020928)%2C Ribosomal protein L5%2C N-terminal (InterPro:IPR020927)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1)%3B Has 7630 Blast hits to 7630 proteins in 2736 species: Archae - 313%3B Bacteria - 4930%3B Metazoa - 255%3B Fungi - 164%3B Plants - 275%3B Viruses - 0%3B Other Eukaryotes - 1693 (source: NCBI BLink). Ribosomal L5P family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic large ribosomal subunit%2C vacuole%3B EXPRESSED IN: male gametophyte%2C leaf%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132)%2C Ribosomal protein L5%2C conserved site (InterPro:IPR020929)%2C Ribosomal protein L5%2C N-terminal (InterPro:IPR020927)%2C Ribosomal protein L5%2C C-terminal (InterPro:IPR020928)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1)%3B Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312%3B Bacteria - 5083%3B Metazoa - 254%3B Fungi - 163%3B Plants - 278%3B Viruses - 0%3B Other Eukaryotes - 1764 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC09g51470 ChrC09 + View
Brassica carinata BcaNung02671 Contig943 + View
Brassica carinata BcaC03g16786 ChrC03 - View
Brassica carinata BcaB04g18495 ChrB04 + View
Brassica carinata BcaC06g31518 ChrC06 + View
Brassica napus C07p49950 C07 + View
Brassica napus C01p12710 C01 + View
Brassica napus C07p29030 C07 - View
Brassica napus A02p29340 A02 - View
Brassica napus A03p51500 A03 + View
Brassica napus C02p46600 C02 - View
Brassica napus A06p46390 A06 + View
Brassica napus A01p10750 A01 + View
Brassica oleracea BolC2t10712H C2 - View
Brassica oleracea BolC7t43442H C7 - View
Brassica oleracea BolC1t01248H C1 + View
Brassica oleracea BolC7t45498H C7 + View
Brassica rapa BraA01t01021Z A01 + View
Brassica rapa BraA06t27503Z A06 + View
Brassica rapa BraA03t14233Z A03 + View
Brassica rapa BraA02t07964Z A02 - View
Beta vulgaris EL10Ac9g20984 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0015183 hypothetical protein AMTR_s00025p00203150 [Amborella trichopoda] Chr7 + View
Camellia sinensis var. sinensis CSS0045621 60S ribosomal protein L11, putative [Ricinus communis] Chr8 + View
Capsicum annuum CAN.G1360.17 PGAv.1.6.scaffold1360 - View
Corylus avellana Haze_13427 Similar to RPL11B: 60S ribosomal protein L11-2 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_06193 Similar to RPL11: 60S ribosomal protein L11 (Oryza sativa subsp. indica OX%3D39946) 2 - View
Coffea canephora Cc05_g08530 60S ribosomal protein L11 chr5 + View
Citrus clementina Ciclev10016873m.g scaffold_2 + View
Citrus clementina Ciclev10016875m.g scaffold_2 + View
Ceratophyllum demersum CDE10G1125 8 + View
Ceratophyllum demersum CDE04G0826 2 - View
Cardamine hirsuta CARHR225580 50S ribosomal protein L5 Chr7 + View
Cardamine hirsuta CARHR176200 50S ribosomal protein L5 Chr6 + View
Carya illinoinensis CiPaw.09G071700 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr09 + View
Citrullus lanatus ClCG07G002650 Ribosomal protein L11-like CG_Chr07 - View
Citrullus lanatus ClCG03G007540 60S ribosomal protein L11 CG_Chr03 - View
Citrullus lanatus ClCG01G023830 60S ribosomal protein L11, putative CG_Chr01 + View
Cucumis melo MELO3C007204.2 60S ribosomal protein L11-like chr08 - View
Cucumis melo MELO3C002668.2 60S ribosomal protein L11 chr12 - View
Corchorus olitorius COL.COLO4_31259 Ribosomal protein L5 AWUE01020832.1 - View
Carica papaya Cpa.g.sc52.157 supercontig_52 - View
Carica papaya Cpa.g.sc7.103 supercontig_7 - View
Capsella rubella Carub.0008s0221 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) scaffold_8 + View
Capsella rubella Carub.0007s2251 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) scaffold_7 - View
Cucumis sativus L. CsaV3_6G051000 Ribosomal protein chr6 + View
Cucumis sativus L. CsaV3_1G033190 Ribosomal protein chr1 - View
Daucus carota DCAR_013278 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_009775 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv12765 GWHABJS00000020 - View
Davidia involucrata Dinv11959 GWHABJS00000001 - View
Durio zibethinus Duzib192G0814 NW_019168037.1 + View
Durio zibethinus Duzib160G0289 NW_019168015.1 - View
Durio zibethinus Duzib235G1546 NW_019167982.1 - View
Erigeron canadensis ECA236G0880 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.D00478 Chr04 - View
Eucalyptus grandis Eucgr.A01929 Chr01 + View
Erythranthe guttata Migut.M00275 scaffold_13 + View
Eutrema salsugineum Thhalv10001041m.g PTHR11994//PTHR11994:SF13 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED scaffold_20 - View
Eutrema salsugineum Thhalv10026344m.g scaffold_1 - View
Fragaria x ananassa FAN11G0047 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-4 + View
Fragaria x ananassa FAN21G1492 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-2 - View
Fragaria x ananassa FAN14G2161 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN16G0546 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria x ananassa FAN25G2804 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN02G3837 PTHR11994//PTHR11994:SF13 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6-4 - View
Fragaria vesca FvH4_6g27670 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6 - View
Fragaria vesca FvH4_3g07450 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Fvb3 - View
Gossypium hirsutum Gohir.A05G154100 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) A05 - View
Gossypium hirsutum Gohir.A10G035600 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) A10 - View
Gossypium hirsutum Gohir.D06G137800 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D06 + View
Gossypium hirsutum Gohir.A09G074800 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) A09 + View
Gossypium hirsutum Gohir.D06G207000 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D06 - View
Gossypium hirsutum Gohir.D10G036300 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D10 - View
Gossypium hirsutum Gohir.D05G156900 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D05 - View
Gossypium hirsutum Gohir.A06G199700 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) A06 - View
Gossypium hirsutum Gohir.A06G132300 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) A06 + View
Glycine max Glyma.12G131600 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Gm12 - View
Gossypium raimondii Gorai.011G038200 Chr11 - View
Gossypium raimondii Gorai.010G241400 Chr10 - View
Gossypium raimondii Gorai.009G161300 Chr09 - View
Gossypium raimondii Gorai.010G160100 Chr10 + View
Helianthus annuus HanXRQChr15g0480771 Putative ribosomal protein L5; Ribosomal protein L5 domain; Ribosomal protein L5, C-terminal; Ribosomal protein L5, N-terminal HanXRQChr15 + View
Helianthus annuus HanXRQChr04g0115801 Probable 60S ribosomal protein L11 HanXRQChr04 + View
Lupinus albus Lalb_Chr15g0086231 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Lalb_Chr15 + View
Lupinus albus Lalb_Chr18g0054671 PTHR11994//PTHR11994:SF13 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Lalb_Chr18 + View
Lonicera japonica Lj8C100G12 GWHAAZE00000008 - View
Lonicera japonica Lj1A1174T74 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_1_109301 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_4_48420 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_7_24281 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Lsat_1_v8_lg_7 + View
Magnolia biondii MBI07_g09548_MAGBIO AED:0.02 Chr07 - View
Malus domestica MD17G1264500 Ribosomal L5P family protein Chr17 - View
Malus domestica MD10G1276900 ribosomal protein large subunit 16A Chr10 - View
Malus domestica MD05G1297100 ribosomal protein large subunit 16A Chr05 - View
Malus domestica MD09G1235900 Ribosomal L5P family protein Chr09 - View
Manihot esculenta Manes.17G058100 Chromosome17 + View
Manihot esculenta Manes.16G041800 Chromosome16 + View
Nelumbo nucifera Nn3g21125 chr3 - View
Nelumbo nucifera Nn1g04500 chr1 + View
Nicotiana tabacum Nitab4.5_0000249g0140 Ribosomal protein L5, Ribosomal protein L5 domain, Ribosomal protein L5, conserved site Nitab4.5_0000249 - View
Olea europaea Oeu019015.1 chr19 + View
Oryza sativa ssp. japonica Os01g0205500 Similar to 60S ribosomal protein L11-2 (L16). Splice isoform 2. chr01 + View
Oryza sativa ssp. japonica Os02g0235600 Similar to 60S ribosomal protein L11-2 (L16). Splice isoform 2. chr02 + View
Petunia axillaris Peaxi162Scf00469g00530 60S ribosomal protein L11-1 Peaxi162Scf00469 + View
Punica granatum PGR142G3242 NC_045128.1 - View
Punica granatum PGR042G1504 NC_045130.1 - View
Prunus persica Prupe.4G065200 Pp04 + View
Papaver somniferum PSO782G4647 NC_039365.1 + View
Populus trichocarpa Potri.011G068900 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr11 + View
Quercus lobata QL05p048349 5 + View
Quercus lobata QL08p042282 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0011401 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim02G0145200 chr02 + View
Rhododendron simsii Rhsim06G0129900 chr06 - View
Rhododendron simsii Rhsim04G0075900 chr04 + View
Salvia bowleyana SalBow7G1038 GWHASIU00000005 + View
Salix brachista Sabra11G0049900 GWHAAZH00000011 + View
Simmondsia chinensis Sc12g0003650 GWHAASQ00000012 + View
Sechium edule Sed0000237 LG01 + View
Sechium edule Sed0001714 LG08 - View
Sechium edule Sed0004754 LG04 - View
Solanum lycopersicum Solyc10g007980.3 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) SL4.0ch10 - View
Solanum lycopersicum Solyc07g055230.4 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) SL4.0ch07 + View
Schrenkiella parvula Sp7g17430 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED ch7-4 + View
Schrenkiella parvula Sp2g10690 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) ch2-4 - View
Solanum pennellii Sopen10g003850 encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. | ribosomal protein large subunit 16A (RPL16A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 , Ribosomal protein L5, conserved site , Ribosomal protein L5, N-terminal , Ribosomal protein L5, C-terminal | BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein Spenn-ch10 - View
Solanum pennellii Sopen07g026990 encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. | ribosomal protein large subunit 16A (RPL16A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 , Ribosomal protein L5, conserved site , Ribosomal protein L5, N-terminal , Ribosomal protein L5, C-terminal | BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400020434 Ribosomal protein L11 ST4.03ch07 + View
Selenicereus undatus Hund00862 Scaffold_33678 - View
Trochodendron aralioides TAR627G0718 group6 + View
Trochodendron aralioides TAR629G0405 group0 + View
Trochodendron aralioides TAR624G0369 group9 + View
Tarenaya hassleriana THA.LOC104798433 60S ribosomal protein L11-1-like NW_010967966.1 + View
Tarenaya hassleriana THA.LOC104806164 60S ribosomal protein L11-1-like NW_010962392.1 + View
Tarenaya hassleriana THA.LOC104803021 60S ribosomal protein L11-1 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104812879 60S ribosomal protein L11-1-like isoform X1 NW_010965372.1 + View
Tripterygium wilfordii TWI09G0111 NC_052245.1 + View
Tripterygium wilfordii TWI73G0319 NC_052232.1 - View
Tripterygium wilfordii TWI53G1878 NC_052244.1 + View
Tripterygium wilfordii TWI59G0955 NC_052248.1 + View
Vaccinium macrocarpon vmacro16048 Similar to RPL11A: 60S ribosomal protein L11-1 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro12386 Similar to RPL11A: 60S ribosomal protein L11-1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01020743001 chr12 - View
Vitis vinifera GSVIVG01021244001 chr10 + View