Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Thecc.08G060400 Patched family protein Chromosome_8 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G16760 LG-6 - View
Acer truncatum Atru.chr13.127 chr13 + View
Acer truncatum Atru.chr5.3545 chr5 + View
Arabidopsis lyrata AL7G10220 scaffold_7 - View
Amaranthus hybridus Ah.01g023750 Pentatricopeptide repeat-containing protein At2g17140 AmaHy_arrow1_Scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TAF7VU K12385 - Niemann-Pick C1 protein (NPC1) arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7A0A2P K12385 - Niemann-Pick C1 protein (NPC1) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT4G38350 Patched family protein Patched family protein%3B FUNCTIONS IN: hedgehog receptor activity%3B LOCATED IN: plasma membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Niemann-Pick C type protein (InterPro:IPR004765)%2C Patched (InterPro:IPR003392)%2C Sterol-sensing 5TM box (InterPro:IPR000731)%3B BEST Arabidopsis thaliana protein match is: Patched family protein (TAIR:AT1G42470.1)%3B Has 3325 Blast hits to 2735 proteins in 472 species: Archae - 80%3B Bacteria - 454%3B Metazoa - 1756%3B Fungi - 181%3B Plants - 170%3B Viruses - 0%3B Other Eukaryotes - 684 (source: NCBI BLink). Chr4 - View
Beta vulgaris EL10Ac9g21241 K12385 - Niemann-Pick C1 protein (NPC1) Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0002623 PREDICTED: LOW QUALITY PROTEIN: Niemann-Pick C1 protein [Vitis vinifera] Chr9 - View
Capsicum annuum CAN.G311.125 PGAv.1.6.scaffold311 - View
Cannabis sativa CANSAT25G3484 NC_044370.1 + View
Cannabis sativa CANSAT25G2553 NC_044370.1 - View
Corylus avellana Haze_22802 Protein of unknown function 3 - View
Coffea canephora Cc10_g00550 Putative Niemann-Pick C1 protein chr10 + View
Citrus clementina Ciclev10000039m.g scaffold_5 - View
Citrus clementina Ciclev10030120m.g scaffold_8 + View
Ceratophyllum demersum CDE06G1400 4 - View
Carpinus fangiana Cfa005358 Cfa02 - View
Carpinus fangiana Cfa014096 Cfa05 - View
Carya illinoinensis CiPaw.05G091900 K12385 - Niemann-Pick C1 protein (NPC1) Chr05 - View
Carya illinoinensis CiPaw.07G137500 K12385 - Niemann-Pick C1 protein (NPC1) Chr07 + View
Carya illinoinensis CiPaw.08G074200 K12385 - Niemann-Pick C1 protein (NPC1) Chr08 - View
Citrullus lanatus ClCG11G018740 Patched family protein CG_Chr11 - View
Cucumis melo MELO3C017027.2 Niemann-Pick C1 protein isoform X1 chr07 + View
Corchorus olitorius COL.COLO4_17925 Patched AWUE01016398.1 + View
Carica papaya Cpa.g.sc26.185 supercontig_26 + View
Carica papaya Cpa.g.sc20.208 supercontig_20 - View
Chenopodium quinoa AUR62040814 NPC1: Niemann-Pick C1 protein C_Quinoa_Scaffold_1283 - View
Chenopodium quinoa AUR62012915 NPC1: Niemann-Pick C1 protein C_Quinoa_Scaffold_1040 + View
Chenopodium quinoa AUR62036842 NPC1: Niemann-Pick C1 protein C_Quinoa_Scaffold_3356 + View
Capsella rubella Carub.0007s0024 scaffold_7 - View
Cucumis sativus L. CsaV3_6G010220 Niemann-Pick C1 protein-like chr6 + View
Cucumis sativus L. CsaV3_4G037280 Niemann-pick c1 protein chr4 - View
Daucus carota DCAR_013926 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_006284 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv31954 GWHABJS00000002 - View
Davidia involucrata Dinv41875 GWHABJS00000002 - View
Durio zibethinus Duzib041G0747 NW_019167826.1 + View
Durio zibethinus Duzib132G1131 NW_019167915.1 + View
Durio zibethinus Duzib093G0382 NW_019167937.1 - View
Erigeron canadensis ECA238G2170 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.F01780 Chr06 - View
Eucalyptus grandis Eucgr.I01521 Chr09 - View
Eutrema salsugineum Thhalv10024233m.g K12385 - Niemann-Pick C1 protein (NPC1) scaffold_1 - View
Fragaria x ananassa FAN15G2627 K12385 - Niemann-Pick C1 protein (NPC1) Fvb2-4 - View
Fragaria x ananassa FAN24G2145 K12385 - Niemann-Pick C1 protein (NPC1) Fvb2-2 + View
Fragaria vesca FvH4_2g16650 K12385 - Niemann-Pick C1 protein (NPC1) Fvb2 - View
Gossypium hirsutum Gohir.A01G175200 PTHR10796:SF117 - PATCHED FAMILY PROTEIN A01 - View
Gossypium hirsutum Gohir.A01G104800 K12385 - Niemann-Pick C1 protein (NPC1) A01 + View
Gossypium hirsutum Gohir.D01G166300 K12385 - Niemann-Pick C1 protein (NPC1) D01 - View
Gossypium hirsutum Gohir.D01G090000 PTHR10796:SF117 - PATCHED FAMILY PROTEIN D01 + View
Glycine max Glyma.14G001500 K12385 - Niemann-Pick C1 protein (NPC1) Gm14 + View
Glycine max Glyma.02G310900 PF02460//PF12349//PF16414 - Patched family (Patched) // Sterol-sensing domain of SREBP cleavage-activation (Sterol-sensing) // Niemann-Pick C1 N terminus (NPC1_N) Gm02 + View
Gossypium raimondii Gorai.002G206800 Chr02 - View
Gossypium raimondii Gorai.002G115700 Chr02 + View
Hydrangea macrophylla Hma1.2p1_1100F.1_g256940 Hma1.2p1_1100F.1 + View
Hydrangea macrophylla Hma1.2p1_0271F.1_g108870 Hma1.2p1_0271F.1 + View
Lonicera japonica Lj5A172G81 GWHAAZE00000005 + View
Malus domestica MD10G1139800 Patched family protein Chr10 - View
Manihot esculenta Manes.05G130900 Chromosome05 + View
Medicago truncatula Medtr3g115450 niemann-pick C1-like protein chr3 - View
Medicago truncatula Medtr5g099070 niemann-pick C1-like protein chr5 - View
Nelumbo nucifera Nn6g31715 chr6 + View
Nelumbo nucifera Nn5g30968 chr5 - View
Petunia axillaris Peaxi162Scf00711g00211 Niemann-Pick C1 protein Peaxi162Scf00711 + View
Punica granatum PGR083G1740 NC_045133.1 - View
Punica granatum PGR142G4088 NC_045128.1 + View
Prunus persica Prupe.8G178600 Pp08 - View
Pisum sativum Psat2g001080 Niemann-Pick C1 N terminus chr2LG1 + View
Papaver somniferum PSO675G3157 NC_039358.1 - View
Papaver somniferum PSO541G5974 NC_039363.1 - View
Populus trichocarpa Potri.002G009600 PTHR10796 - PATCHED-RELATED Chr02 + View
Populus trichocarpa Potri.009G167000 K12385 - Niemann-Pick C1 protein (NPC1) Chr09 - View
Quercus lobata QL02p014478 CM012294 - View
Quercus lobata QL11p055968 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0280781 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim11G0197500 chr11 - View
Rhododendron simsii Rhsim06G0006500 chr06 + View
Salix brachista Sabra02G0007000 GWHAAZH00000002 + View
Salix brachista Sabra05G0195100 GWHAAZH00000005 - View
Simmondsia chinensis Sc08g0002290 GWHAASQ00000008 + View
Sechium edule Sed0023022 LG01 + View
Solanum lycopersicum Solyc04g082490.3 Niemann-Pick C1 protein-like (AHRD V3.3 *** A0A2I4DPI3_9ROSI) SL4.0ch04 - View
Schrenkiella parvula Sp7g37420 K12385 - Niemann-Pick C1 protein (NPC1) ch7-6 + View
Solanum pennellii Sopen04g036110 Patched family protein | FUNCTIONS IN: hedgehog receptor activity | LOCATED IN: membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Niemann-Pick C type protein , Patched , Sterol-sensing 5TM box | BEST Arabidopsis thaliana protein match is: Patched family protein ., Patched Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400009984 Hedgehog receptor ST4.03ch04 - View
Selenicereus undatus Hund06161 Scaffold_33676 + View
Trochodendron aralioides TAR628G0472 group5 - View
Trochodendron aralioides TAR381G0938 group11 + View
Trifolium pratense TPR.G18634 Tp57577_TGAC_v2_LG4 + View
Trifolium pratense TPR.G38096 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI56G0100 NC_052242.1 - View
Tripterygium wilfordii TWI31G1441 NC_052233.1 + View
Vaccinium macrocarpon vmacro21805 Similar to NPC1: NPC intracellular cholesterol transporter 1 (Homo sapiens OX%3D9606) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02333 Protein of unknown function chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2497 CM024072.1 - View
Vitis vinifera GSVIVG01023884001 chr3 - View
Vitis vinifera GSVIVG01013373001 chr18 + View