Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TWI18G1348 NC_052241.1 - View
TWI38G1716 NC_052252.1 + View
TWI36G0953 NC_052237.1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.3330 chr6 - View
Actinidia chinensis Actinidia10779 Lachesis_group15 + View
Actinidia chinensis Actinidia02313 Lachesis_group20 - View
Arabidopsis lyrata AL3G19240 scaffold_3 + View
Arabidopsis lyrata AL6G47500 scaffold_6 + View
Avicennia marina MSTRG.7163 ScioBoG_102840_HRSCAF_103099 + View
Avicennia marina MSTRG.14886 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.14g087570 AmaHy_arrow1_Scaffold_14 + View
Amaranthus hybridus Ah.14g082860 AmaHy_arrow1_Scaffold_14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F3ZHRM PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DDZ1HR PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT3G07870 F-box and associated interaction domains-containing protein F-box and associated interaction domains-containing protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 3 (InterPro:IPR013187)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G23880.1)%3B Has 2008 Blast hits to 1989 proteins in 53 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 2006%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT4G12560 F-box and associated interaction domains-containing protein Encodes CPR1 (Constitutive Expresser of PR Genes 1%2C also known as CPR30)%2C a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30)%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 1 (InterPro:IPR006527)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1)%3B Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1741%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: negative regulation of defense response%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 8 plant structures%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%2C F-box associated domain%2C type 1 (InterPro:IPR006527)%2C F-box associated interaction domain (InterPro:IPR017451)%3B BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1)%3B Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1741%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr4 + View
Beta vulgaris EL10Ac9g22752 Chr9_EL10_PGA_scaffold8 + View
Corylus avellana Haze_12717 Similar to CPR1: F-box protein CPR1 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc09_g00810 Putative F-box protein CPR30 chr9 + View
Citrus clementina Ciclev10015426m.g scaffold_2 - View
Carpinus fangiana Cfa014273 Cfa06 + View
Cardamine hirsuta CARHR082600 F-box family protein Chr3 + View
Carya illinoinensis CiPaw.03G276600 PF07734//PF12937 - F-box associated (FBA_1) // F-box-like (F-box-like) Chr03 - View
Carya illinoinensis CiPaw.04G194400 PF00646 - F-box domain (F-box) Chr04 - View
Citrullus lanatus ClCG02G009480 F-box family protein CG_Chr02 + View
Chenopodium quinoa AUR62015902 At3g06240: F-box/kelch-repeat protein At3g06240 C_Quinoa_Scaffold_1529 - View
Capsella rubella Carub.0003s0745 PF00646//PF08268 - F-box domain (F-box) // F-box associated domain (FBA_3) scaffold_3 + View
Davidia involucrata Dinv05849 GWHABJS00000001 + View
Davidia involucrata Dinv40822 GWHABJS00000013 + View
Durio zibethinus Duzib160G0463 NW_019168015.1 - View
Durio zibethinus Duzib133G1250 NW_019167938.1 + View
Durio zibethinus Duzib192G0105 NW_019168037.1 + View
Durio zibethinus Duzib211G0499 NW_019168049.1 + View
Durio zibethinus Duzib138G1831 NW_019167893.1 + View
Eucalyptus grandis Eucgr.K00668 Chr11 + View
Eucalyptus grandis Eucgr.A01070 Chr01 + View
Erythranthe guttata Migut.M00038 scaffold_13 + View
Fragaria x ananassa FAN02G0895 Fvb6-4 + View
Fragaria x ananassa FAN02G2534 PF00646 - F-box domain (F-box) Fvb6-4 - View
Fragaria x ananassa FAN09G4687 PF00646 - F-box domain (F-box) Fvb6-2 - View
Gossypium hirsutum Gohir.D06G160200 PF00646 - F-box domain (F-box) D06 - View
Gossypium hirsutum Gohir.A07G189800 PF00646 - F-box domain (F-box) A07 - View
Gossypium hirsutum Gohir.D07G173800 PF08268//PF12937 - F-box associated domain (FBA_3) // F-box-like (F-box-like) D07 + View
Gossypium hirsutum Gohir.A06G153400 A06 - View
Gossypium hirsutum Gohir.D07G196000 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) D07 - View
Gossypium hirsutum Gohir.D11G157200 PF07734//PF12937 - F-box associated (FBA_1) // F-box-like (F-box-like) D11 + View
Gossypium hirsutum Gohir.A11G150700 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) A11 + View
Glycine max Glyma.09G010600 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) Gm09 - View
Glycine max Glyma.17G008200 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) Gm17 + View
Glycine max Glyma.15G115100 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) Gm15 - View
Glycine max Glyma.07G265800 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) Gm07 - View
Gossypium raimondii Gorai.001G194200 Chr01 + View
Gossypium raimondii Gorai.010G186900 Chr10 - View
Gossypium raimondii Gorai.007G167700 Chr07 + View
Lupinus albus Lalb_Chr20g0119291 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) Lalb_Chr20 - View
Lotus japonicus Lj4g0008928 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) chr4 - View
Lotus japonicus Lj6g0017026 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) chr6 - View
Malus domestica MD03G1192800 F-box family protein Chr03 + View
Malus domestica MD09G1119500 F-box and associated interaction domains-containing protein Chr09 - View
Malus domestica MD05G1358500 F-box and associated interaction domains-containing protein Chr05 - View
Manihot esculenta Manes.13G063819 Chromosome13 + View
Manihot esculenta Manes.12G062501 Chromosome12 - View
Medicago truncatula Medtr4g133170 F-box and associated interaction domain protein chr4 - View
Punica granatum PGR142G2144 NC_045128.1 - View
Prunus persica Prupe.3G204700 PF08268 - F-box associated domain (FBA_3) Pp03 + View
Prunus persica Prupe.4G009600 Pp04 + View
Papaver somniferum PSO017G0274 NC_039362.1 + View
Populus trichocarpa Potri.014G162600 PF00646//PF08268 - F-box domain (F-box) // F-box associated domain (FBA_3) Chr14 + View
Populus trichocarpa Potri.002G223000 PF07734//PF12937 - F-box associated (FBA_1) // F-box-like (F-box-like) Chr02 + View
Phaseolus vulgaris Phvul.003G084100 PF00646//PF07734 - F-box domain (F-box) // F-box associated (FBA_1) Chr03 + View
Quercus lobata QL08p029175 8 - View
Rhododendron simsii Rhsim06G0171400 chr06 + View
Striga asiatica SGA_v2.0_scaffold7G03755 scaffold7 + View
Striga asiatica SGA_v2.0_scaffold4G01870 scaffold4 + View
Salvia bowleyana SalBow8G2679 GWHASIU00000004 - View
Salix brachista Sabra14G0124200 GWHAAZH00000014 + View
Salix brachista Sabra02G0170100 GWHAAZH00000002 + View
Simmondsia chinensis Sc21g0000910 GWHAASQ00000021 + View
Sechium edule Sed0022248 LG01 - View
Sechium edule Sed0024435 LG01 + View
Solanum lycopersicum Solyc11g012530.3 F-box protein CPR1 isoform X1 (AHRD V3.3 *-* XP_004250283.2) SL4.0ch11 + View
Solanum lycopersicum Solyc12g006130.3 F-box protein (AHRD V3.3 *** A0A1J3HTG0_NOCCA) SL4.0ch12 + View
Schrenkiella parvula Sp6g04950 PTHR32133:SF121 - F-BOX PROTEIN CPR30 ch6-1 - View
Schrenkiella parvula Sp3g06790 PF00646//PF08268 - F-box domain (F-box) // F-box associated domain (FBA_3) ch3-1 + View
Solanum pennellii Sopen12g002090 F-box and associated interaction domains-containing protein | CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like , F-box domain, Skp2-like , F-box associated domain, type 3 , F-box associated interaction domain | BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein Spenn-ch12 + View
Solanum pennellii Sopen11g007270 Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. | CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: negative regulation of defense response | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 8 plant structures | CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like , F-box domain, Skp2-like , F-box associated domain, type 1 , F-box associated interaction domain | BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400013291 F-box family protein ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400004294 F-box family protein ST4.03ch12 - View
Trochodendron aralioides TAR627G1140 group6 + View
Trochodendron aralioides TAR626G1746 group3 + View
Theobroma cacao Thecc.01G185200 F-box and associated interaction domains-containing protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104819049 F-box protein At3g07870 NW_010966177.1 + View
Vaccinium macrocarpon vmacro09384 Similar to At3g07870: F-box protein At3g07870 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View