Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TAR633G0321 group2 - View
TAR623G0411 group7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G21820 LG-5 - View
Aethionema arabicum Aa31LG10G8230 LG-10 - View
Actinidia chinensis Actinidia11317 Lachesis_group21 + View
Actinidia chinensis Actinidia39865 Lachesis_group17 + View
Arabidopsis lyrata AL4G32800 scaffold_4 - View
Arabidopsis lyrata AL5G33850 scaffold_5 - View
Arabidopsis thaliana AT2G36620 ribosomal protein L24 RPL24A encodes ribosomal protein L24%2C homolog of cytosolic RPL24%2C found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs%2C RPL24A (AT2G36620) and RPL24B (AT3G53020). ribosomal protein L24 (RPL24A)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C plasma membrane%2C chloroplast%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1)%3B Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106%3B Bacteria - 37%3B Metazoa - 463%3B Fungi - 306%3B Plants - 338%3B Viruses - 0%3B Other Eukaryotes - 230 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G53020 Ribosomal protein L24e family protein RPL24B encodes ribosomal protein L24%2C homolog of cytosolic RPL24%2C found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs%2C RPL24A (AT2G36620) and RPL24B. Mutants showed defects in apical-basal gynoecium patterning similar to previously described ett and mp mutants. Transformation of stv1-1 mutant with a uORF-eliminated ETT construct partially suppressed the stv1 gynoecium phenotype%2C implying that STV1 could influence ETT translation through its uORFs. Regulated by TCP20. SHORT VALVE1 (STV1)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: auxin mediated signaling pathway%2C gynoecium development%2C translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C nucleolus%3B EXPRESSED IN: 28 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988)%3B BEST Arabidopsis thaliana protein match is: ribosomal protein L24 (TAIR:AT2G36620.1)%3B Has 1463 Blast hits to 1456 proteins in 346 species: Archae - 110%3B Bacteria - 20%3B Metazoa - 460%3B Fungi - 300%3B Plants - 340%3B Viruses - 0%3B Other Eukaryotes - 233 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC07g39666 ChrC07 - View
Brassica carinata BcaB01g00316 ChrB01 + View
Brassica carinata BcaC01g05645 ChrC01 + View
Brassica carinata BcaC02g09196 ChrC02 + View
Brassica carinata BcaC02g11775 ChrC02 - View
Brassica carinata BcaB02g08543 ChrB02 + View
Brassica napus C03p23700 C03 - View
Brassica napus A04p06490 A04 + View
Brassica napus A09p46080 A09 - View
Brassica napus C08p28340 C08 - View
Brassica oleracea BolC8t50442H C8 - View
Brassica oleracea BolC4t25566H C4 + View
Brassica rapa BraA05t19881Z A05 + View
Brassica rapa BraA04t16352Z A04 + View
Brassica rapa BraA09t40072Z A09 - View
Capsicum annuum CAN.G824.51 PGAv.1.6.scaffold824 - View
Cannabis sativa CANSAT80G0745 NC_044372.1 - View
Cicer arietinum L. Ca_11607_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_08951_v3 Ca_LG3_v3 + View
Corylus avellana Haze_19509 Similar to RPL24: 60S ribosomal protein L24 (Prunus avium OX%3D42229) 10 + View
Coffea canephora Cc06_g04980 60S ribosomal protein L24 chr6 + View
Cardamine hirsuta CARHR130900 60S ribosomal protein L24 Chr4 - View
Cardamine hirsuta CARHR162910 60S ribosomal protein L24 Chr5 - View
Carya illinoinensis CiPaw.13G034900 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Chr13 + View
Carya illinoinensis CiPaw.10G003400 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Chr10 + View
Citrullus lanatus ClCG04G009670 60S ribosomal protein L24, putative CG_Chr04 + View
Citrullus lanatus ClCG10G019550 60S ribosomal protein L24, putative CG_Chr10 - View
Cucumis melo MELO3C024506.2 60S ribosomal protein L24 chr08 - View
Cucumis melo MELO3C009419.2 60S ribosomal protein L24-like chr04 - View
Carica papaya Cpa.g.sc5.107 supercontig_5 - View
Capsella rubella Carub.0004s1844 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) scaffold_4 - View
Capsella rubella Carub.0005s1952 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) scaffold_5 - View
Cucumis sativus L. CsaV3_3G036650 60S ribosomal protein L24-like chr3 + View
Cucumis sativus L. CsaV3_6G040310 60S ribosomal protein L24 chr6 + View
Daucus carota DCAR_017637 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_020788 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv35851 GWHABJS00000015 + View
Davidia involucrata Dinv37377 GWHABJS00000021 - View
Durio zibethinus Duzib128G0195 NW_019168481.1 + View
Durio zibethinus Duzib128G1774 NW_019168481.1 - View
Durio zibethinus Duzib093G1442 NW_019167937.1 - View
Durio zibethinus Duzib106G0312 NW_019168492.1 - View
Eutrema salsugineum Thhalv10010779m.g PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED scaffold_16 + View
Eutrema salsugineum Thhalv10017341m.g PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED scaffold_10 - View
Fragaria x ananassa FAN09G4589 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Fvb6-2 - View
Fragaria x ananassa FAN05G4674 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Fvb6-3 - View
Fragaria x ananassa FAN14G4889 PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN02G1334 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Fvb6-4 + View
Fragaria x ananassa FAN05G3094 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Fvb6-3 - View
Fragaria vesca FvH4_6g17440 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Fvb6 + View
Gossypium hirsutum Gohir.A09G142700 PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED A09 - View
Gossypium hirsutum Gohir.D01G199701 PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED D01 - View
Gossypium hirsutum Gohir.D09G138900 PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED D09 - View
Gossypium hirsutum Gohir.A01G210920 PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED A01 - View
Glycine max Glyma.03G189300 PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED Gm03 + View
Glycine max Glyma.19G189600 PTHR10792//PTHR10792:SF11 - 60S RIBOSOMAL PROTEIN L24 // SUBFAMILY NOT NAMED Gm19 + View
Gossypium raimondii Gorai.002G244300 Chr02 - View
Gossypium raimondii Gorai.006G159400 Chr06 - View
Hydrangea macrophylla Hma1.2p1_0084F.1_g042980 Hma1.2p1_0084F.1 + View
Lupinus albus Lalb_Chr01g0018451 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Lalb_Chr01 - View
Lupinus albus Lalb_Chr25g0288741 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Lalb_Chr25 - View
Lonicera japonica Lj2C26T1 GWHAAZE00000002 + View
Malus domestica MD12G1100700 ribosomal protein L24 Chr12 - View
Malus domestica MD14G1094900 ribosomal protein L24 Chr14 - View
Medicago truncatula Medtr1g061670 60S ribosomal protein L24-2 chr1 - View
Medicago truncatula Medtr7g103320 60S ribosomal protein L24-2 chr7 + View
Nicotiana tabacum Nitab4.5_0000381g0400 Ribosomal protein L24e domain, Ribosomal protein L24e-related, Ribosomal protein L24e, conserved site, TRASH domain Nitab4.5_0000381 - View
Nicotiana tabacum Nitab4.5_0000132g0300 Ribosomal protein L24e-related, Ribosomal protein L24e domain, TRASH domain, Ribosomal protein L24e, conserved site Nitab4.5_0000132 - View
Nicotiana tabacum Nitab4.5_0000680g0080 Ribosomal protein L24e domain, TRASH domain, Ribosomal protein L24e-related, Ribosomal protein L24e, conserved site Nitab4.5_0000680 - View
Petunia axillaris Peaxi162Scf00110g00117 60S ribosomal protein L24 Peaxi162Scf00110 + View
Punica granatum PGR142G0677 NC_045128.1 + View
Punica granatum PGR004G2557 NC_045131.1 - View
Prunus persica Prupe.7G121200 Pp07 - View
Pisum sativum Psat3g036920 Ribosomal protein L24e chr3LG5 - View
Phaseolus vulgaris Phvul.007G224900 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Chr07 - View
Phaseolus vulgaris Phvul.001G184700 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) Chr01 + View
Quercus lobata QL07p041002 7 - View
Quercus lobata QL04p040470 4 + View
Rosa chinensis RcHm_v2.0_Chr3g0471681 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim03G0084600 chr03 - View
Simmondsia chinensis Sc09g0005640 GWHAASQ00000009 - View
Simmondsia chinensis Sc20g0001390 GWHAASQ00000020 - View
Sechium edule Sed0014681 LG10 + View
Sechium edule Sed0007956 LG04 + View
Sechium edule Sed0025234 LG02 - View
Solanum lycopersicum Solyc10g083740.3 60S ribosomal protein L24 (AHRD V3.3 *** A0A2G2VU23_CAPBA) SL4.0ch10 - View
Solanum lycopersicum Solyc09g008800.3 60S ribosomal protein l24-like (AHRD V3.3 *** A0A2K3LB43_TRIPR) SL4.0ch09 + View
Solanum lycopersicum Solyc10g085480.2 60S ribosomal protein L24 (AHRD V3.3 *** A0A2G2VU23_CAPBA) SL4.0ch10 + View
Schrenkiella parvula Sp4g18900 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) ch4-6 - View
Schrenkiella parvula Sp5g09300 K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24) ch5-1 + View
Solanum pennellii Sopen09g003590 60S ribosomal protein L24 - Cicer arietinum (Chickpea) (Garbanzo), RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020). | ribosomal protein L24 (RPL24A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, ribosome biogenesis | LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e | BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400028271 Ribosomal protein L24E ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400002729 Ribosomal protein L24 ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400011041 60S ribosomal protein L24 ST4.03ch10 - View
Theobroma cacao Thecc.05G078000 Ribosomal protein L24 Chromosome_5 + View
Theobroma cacao Thecc.10G094200 60S ribosomal protein L24-1 Chromosome_10 + View
Tarenaya hassleriana THA.LOC104823474 60S ribosomal protein L24 NW_010966881.1 - View
Tarenaya hassleriana THA.LOC104826938 60S ribosomal protein L24-like NW_010967707.1 - View
Tarenaya hassleriana THA.LOC104827494 60S ribosomal protein L24 NW_010967708.1 - View
Trifolium pratense TPR.G5696 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI74G0046 NC_052234.1 + View
Tripterygium wilfordii TWI53G1091 NC_052244.1 - View
Tripterygium wilfordii TWI77G0861 NC_052236.1 - View
Vaccinium macrocarpon vmacro07344 Similar to RPL24: 60S ribosomal protein L24 (Prunus avium OX%3D42229) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0249 CM024071.1 - View
Vigna mungo VMungo1383G2318 CM024070.1 + View
Vitis vinifera GSVIVG01033743001 chr8 - View
Vitis vinifera GSVIVG01034676001 chr13 + View