Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TAR369G0364 group18 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G760 LG-10 + View
Acer truncatum Atru.chr3.2098 chr3 + View
Actinidia chinensis Actinidia16236 Lachesis_group24 + View
Actinidia chinensis Actinidia00908 Lachesis_group13 + View
Arabidopsis lyrata AL1G63510 scaffold_1 - View
Amaranthus hybridus Ah.13g075170 Chaperonin CPN60, mitochondrial (HSP60) AmaHy_arrow1_Scaffold_13 + View
Amaranthus hybridus Ah.04g153380 AmaHy_arrow1_Scaffold_4 - View
Arabidopsis thaliana AT1G55490 chaperonin 60 beta encodes the beta subunit of the chloroplast chaperonin 60%2C a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves%2C expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro. chaperonin 60 beta (CPN60B)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: protein folding%2C systemic acquired resistance%2C cell death%2C response to cold%2C chaperone mediated protein folding requiring cofactor%3B LOCATED IN: in 8 components%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperonin Cpn60%2C conserved site (InterPro:IPR018370)%2C Chaperonin Cpn60 (InterPro:IPR001844)%3B BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1)%3B Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804%3B Bacteria - 21846%3B Metazoa - 1741%3B Fungi - 1612%3B Plants - 841%3B Viruses - 2%3B Other Eukaryotes - 7363 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT3G13470 TCP-1/cpn60 chaperonin family protein Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized%2C translocated%2C or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000)%2C AtCpn60alpha2 (At5g18820)%2C AtCpn60beta1 (At1g55490)%2C AtCpn60beta2 (At3g13470)%2C AtCpn60beta3 (At5g56500)%2C AtCpn60beta4 (At1g26230). TCP-1/cpn60 chaperonin family protein%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: protein folding%2C protein refolding%2C cellular protein metabolic process%3B LOCATED IN: in 7 components%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperonin Cpn60%2C conserved site (InterPro:IPR018370)%2C Chaperonin Cpn60 (InterPro:IPR001844)%3B BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2)%3B Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803%3B Bacteria - 21843%3B Metazoa - 1743%3B Fungi - 1612%3B Plants - 836%3B Viruses - 2%3B Other Eukaryotes - 7380 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC04g20083 ChrC04 - View
Brassica carinata BcaB02g10819 ChrB02 + View
Brassica napus A05p17450 A05 + View
Brassica napus C06p16080 C06 - View
Brassica napus C03p92810 C03 - View
Brassica napus A05p36060 A05 - View
Brassica napus C05p54420 C05 - View
Brassica napus C09p48090 C09 + View
Brassica napus A10p13850 A10 + View
Brassica oleracea BolC9t57657H C9 + View
Brassica rapa BraA05t22413Z A05 - View
Brassica rapa BraA05t20640Z A05 + View
Brassica rapa BraA08t32121Z A08 + View
Cannabis sativa CANSAT11G1426 NC_044377.1 - View
Corylus avellana Haze_22933 Similar to RuBisCO large subunit-binding protein subunit beta, chloroplastic (Pisum sativum OX%3D3888) 6 + View
Coffea canephora Cc01_g00200 RuBisCO large subunit-binding protein subunit beta, chloroplastic chr1 - View
Citrus clementina Ciclev10014640m.g scaffold_2 + View
Carpinus fangiana Cfa009548 Cfa04 + View
Cardamine hirsuta CARHR045160 60 kDa chaperonin Chr1 - View
Carya illinoinensis CiPaw.13G177900 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Chr13 - View
Citrullus lanatus ClCG03G014590 60 kDa chaperonin CG_Chr03 - View
Cucumis melo MELO3C015568.2 ruBisCO large subunit-binding protein subunit beta, chloroplastic chr02 + View
Capsella rubella Carub.0003s1293 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED scaffold_3 + View
Capsella rubella Carub.0001s4398 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_1G041580 60 kDa chaperonin chr1 + View
Daucus carota DCAR_001968 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv13481 GWHABJS00000007 - View
Erigeron canadensis ECA238G0215 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.B03593 Chr02 + View
Erythranthe guttata Migut.N00541 scaffold_14 + View
Eutrema salsugineum Thhalv10011330m.g PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED scaffold_7 + View
Fragaria x ananassa FAN11G1770 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3-4 + View
Fragaria x ananassa FAN25G1575 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3-1 + View
Fragaria x ananassa FAN21G1868 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3-2 - View
Fragaria x ananassa FAN16G2195 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3-3 - View
Fragaria vesca FvH4_3g45800 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Fvb3 - View
Helianthus annuus HanXRQChr14g0437191 Probable ruBisCO large subunit-binding protein subunit beta, chloroplastic HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0589F.1_g184800 Hma1.2p1_0589F.1 + View
Lactuca sativa Lsat_1_v5_gn_2_50361 Lsat_1_v8_lg_2 + View
Malus domestica MD11G1002700 TCP-1/cpn60 chaperonin family protein Chr11 + View
Malus domestica MD03G1002900 TCP-1/cpn60 chaperonin family protein Chr03 + View
Manihot esculenta Manes.03G086700 Chromosome03 + View
Manihot esculenta Manes.15G110300 Chromosome15 - View
Olea europaea Oeu060892.1 scaffold856 - View
Punica granatum PGR102G3215 NC_045129.1 - View
Punica granatum PGR119G2340 NC_045132.1 + View
Prunus persica Prupe.6G002500 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Pp06 + View
Populus trichocarpa Potri.001G002500 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Chr01 + View
Populus trichocarpa Potri.003G222400 PTHR11353//PTHR11353:SF8 - CHAPERONIN // CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED Chr03 - View
Rosa chinensis RcHm_v2.0_Chr5g0083881 RcHm_v2.0_Chr5 - View
Striga asiatica SGA_v2.0_scaffold3G01682 scaffold3 - View
Striga asiatica SGA_v2.0_scaffold6G03315 scaffold6 - View
Salvia bowleyana SalBow3G0279 GWHASIU00000006 + View
Salix brachista Sabra01G0001800 GWHAAZH00000001 + View
Salix brachista Sabra03G0165400 GWHAAZH00000003 - View
Sechium edule Sed0021995 LG08 + View
Sechium edule Sed0023320 LG12 - View
Schrenkiella parvula Sp1g41100 PTHR11353:SF8 - CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC-RELATED ch1-2 - View
Selenicereus undatus Hund24854 Scaffold_3410 - View
Theobroma cacao Thecc.09G203400 TCP-1/cpn60 chaperonin family protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104811719 chaperonin 60 subunit beta 3%2C chloroplastic NW_010965372.1 + View
Tripterygium wilfordii TWI34G1642 NC_052235.1 - View
Tripterygium wilfordii TWI60G0468 NC_052246.1 + View
Vitis vinifera GSVIVG01025490001 chr6 + View