Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G17290 LG-1 + View
Arabidopsis lyrata AL8G42070 scaffold_8 - View
Arabidopsis lyrata AL6G20200 scaffold_6 - View
Avicennia marina MSTRG.23433 ScioBoG_3895_HRSCAF_3912 + View
Arabidopsis thaliana AT5G64660 CYS, MET, PRO, and GLY protein 2 CYS%2C MET%2C PRO%2C and GLY protein 2 (CMPG2)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: response to chitin%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G09800 ARM repeat superfamily protein ARM repeat superfamily protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: response to chitin%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C LP.06 six leaves visible%2C M germinated pollen stage%2C 4 anthesis%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: CYS%2C MET%2C PRO%2C and GLY protein 2 (TAIR:AT5G64660.1)%3B Has 1911 Blast hits to 1878 proteins in 97 species: Archae - 0%3B Bacteria - 16%3B Metazoa - 84%3B Fungi - 4%3B Plants - 1697%3B Viruses - 0%3B Other Eukaryotes - 110 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC01g02696 ChrC01 - View
Brassica carinata BcaC04g23301 ChrC04 + View
Brassica carinata BcaB02g09809 ChrB02 - View
Brassica napus C03p61530 C03 + View
Brassica napus A06p31450 A06 - View
Brassica napus C09p09940 C09 - View
Brassica oleracea BolC9t53901H C9 - View
Brassica oleracea BolC3t18413H C3 + View
Brassica rapa BraA06t26081Z A06 - View
Cicer arietinum L. Ca_16924_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_17651_v3 Ca_LG6_v3 - View
Corylus avellana Haze_25133 Similar to PUB28: U-box domain-containing protein 28 (Arabidopsis thaliana OX%3D3702) 8 - View
Carpinus fangiana Cfa002836 Cfa01 - View
Cardamine hirsuta CARHR278630 U-box domain-containing protein Chr8 - View
Carya illinoinensis CiPaw.03G127800 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr03 + View
Citrullus lanatus ClCG01G015580 U-box domain-containing protein CG_Chr01 - View
Cucumis melo MELO3C008040.2 RING-type E3 ubiquitin transferase chr08 + View
Carica papaya Cpa.g.sc42.110 supercontig_42 + View
Chenopodium quinoa AUR62017923 PUB27: U-box domain-containing protein 27 C_Quinoa_Scaffold_3086 - View
Chenopodium quinoa AUR62003612 PUB27: U-box domain-containing protein 27 C_Quinoa_Scaffold_2370 - View
Capsella rubella Carub.0006s0821 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED scaffold_6 - View
Cucumis sativus L. CsaV3_2G018140 RING-type E3 ubiquitin transferase chr2 - View
Cucumis sativus L. CsaV3_6G041810 RING-type E3 ubiquitin transferase chr6 - View
Durio zibethinus Duzib147G0687 NW_019168470.1 - View
Durio zibethinus Duzib187G1115 NW_019167860.1 - View
Durio zibethinus Duzib041G0687 NW_019167826.1 - View
Eucalyptus grandis Eucgr.I00230 Chr09 - View
Eucalyptus grandis Eucgr.H04930 Chr08 + View
Eutrema salsugineum Thhalv10004299m.g PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED scaffold_6 + View
Fragaria x ananassa FAN19G1521 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb1-4 + View
Fragaria vesca FvH4_1g24000 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb1 + View
Gossypium hirsutum Gohir.D10G105900 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED D10 + View
Glycine max Glyma.08G147200 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Gm08 + View
Glycine max Glyma.05G189600 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Gm05 + View
Glycine max Glyma.06G151200 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Gm06 + View
Gossypium raimondii Gorai.011G115700 Chr11 + View
Lupinus albus Lalb_Chr12g0203261 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr12 - View
Lonicera japonica Lj4A851T41 GWHAAZE00000004 - View
Manihot esculenta Manes.12G152200 Chromosome12 + View
Punica granatum PGR102G1022 NC_045129.1 + View
Phaseolus vulgaris Phvul.009G148200 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr09 + View
Phaseolus vulgaris Phvul.002G270300 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr02 + View
Quercus lobata QL06p029766 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0120131 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0002600 chr08 + View
Rhododendron simsii Rhsim10G0138500 chr10 - View
Salix brachista Sabra02G0055100 GWHAAZH00000002 + View
Sechium edule Sed0026573 LG05 + View
Sechium edule Sed0008178 LG10 + View
Solanum tuberosum PGSC0003DMG400025560 Photoperiod-response ST4.03ch11 - View
Tarenaya hassleriana THA.LOC104799472 U-box domain-containing protein 27 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104818463 U-box domain-containing protein 27 NW_010966092.1 - View
Tripterygium wilfordii TWI79G1625 NC_052238.1 - View
Tripterygium wilfordii TWI75G0086 NC_052253.1 + View
Vigna mungo VMungo1309G2205 CM024072.1 - View
Vigna mungo VMungo0251G2475 CM024069.1 + View