Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sp5g24400 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED ch5-6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G8480 LG-7 - View
Aethionema arabicum Aa31LG2G7170 LG-2 + View
Acer truncatum Atru.chr11.1689 chr11 + View
Actinidia chinensis Actinidia31948 Lachesis_group15 - View
Actinidia chinensis Actinidia19922 Lachesis_group10 - View
Actinidia chinensis Actinidia12317 Lachesis_group4 + View
Actinidia chinensis Actinidia33242 Lachesis_group12 + View
Arabidopsis lyrata AL5G13100 scaffold_5 - View
Arabidopsis lyrata AL2G28450 scaffold_2 + View
Avicennia marina MSTRG.13441 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.7765 ScioBoG_102841_HRSCAF_103114 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XTY9PQ PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R2RWAX PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT2G03390 uvrB/uvrC motif-containing protein uvrB/uvrC motif-containing protein%3B FUNCTIONS IN: DNA binding%2C nuclease activity%3B INVOLVED IN: nucleotide-excision repair%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Hemimethylated DNA-binding domain (InterPro:IPR011722)%2C UvrB/UvrC protein (InterPro:IPR001943)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT1G69340 appr-1-p processing enzyme family protein appr-1-p processing enzyme family protein%3B CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function%2C C-terminal (InterPro:IPR001251)%2C Appr-1-p processing (InterPro:IPR002589)%3B BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT2G40600.1)%3B Has 3597 Blast hits to 3538 proteins in 1210 species: Archae - 64%3B Bacteria - 1971%3B Metazoa - 984%3B Fungi - 140%3B Plants - 224%3B Viruses - 8%3B Other Eukaryotes - 206 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC06g34000 ChrC06 + View
Brassica carinata BcaC06g31184 ChrC06 + View
Brassica carinata BcaC03g15074 ChrC03 + View
Brassica napus C02p26300 C02 + View
Brassica napus C07p33850 C07 - View
Brassica napus A07p35630 A07 + View
Brassica napus A06p43150 A06 + View
Brassica napus A02p15840 A02 + View
Brassica napus C06p40580 C06 - View
Brassica oleracea BolC2t08701H C2 + View
Brassica oleracea BolC7t43899H C7 - View
Brassica oleracea BolC6t39374H C6 + View
Brassica rapa BraA06t27203Z A06 + View
Brassica rapa BraA07t31151Z A07 + View
Camellia sinensis var. sinensis CSS0040724 unnamed protein product [Coffea canephora] Chr12 + View
Corylus avellana Haze_11933 Similar to CGT: UDP-glycosyltransferase 13 (Mangifera indica OX%3D29780) 9 + View
Coffea canephora Cc11_g12370 Putative Protein GDAP2 homolog chr11 + View
Citrus clementina Ciclev10032054m.g scaffold_4 - View
Carpinus fangiana Cfa008908 Cfa03 + View
Cardamine hirsuta CARHR062230 Pentatricopeptide repeat-containing protein, putative Chr2 + View
Cardamine hirsuta CARHR145730 DNA binding protein, putative Chr5 - View
Carya illinoinensis CiPaw.05G127900 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Chr05 + View
Carya illinoinensis CiPaw.06G090500 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Chr06 + View
Citrullus lanatus ClCG08G010240 F-box only protein CG_Chr08 + View
Cucumis melo MELO3C011434.2 F-box only protein 21 chr03 + View
Carica papaya Cpa.g.sc1.87 supercontig_1 - View
Chenopodium quinoa AUR62007956 gdap2: Protein GDAP2 homolog C_Quinoa_Scaffold_2646 + View
Capsella rubella Carub.0005s0236 PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) scaffold_5 - View
Capsella rubella Carub.0002s1594 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED scaffold_2 + View
Cucumis sativus L. CsaV3_6G032440 F-box only 21 chr6 + View
Daucus carota DCAR_007181 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_027449 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv16705 GWHABJS00000018 - View
Davidia involucrata Dinv34114 GWHABJS00000008 - View
Durio zibethinus Duzib268G0995 NW_019168270.1 + View
Durio zibethinus Duzib248G0382 NW_019168048.1 - View
Durio zibethinus Duzib251G0769 NW_019167971.1 + View
Erigeron canadensis ECA233G0414 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA246G1706 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.G02463 Chr07 + View
Eucalyptus grandis Eucgr.B03179 Chr02 + View
Erythranthe guttata Migut.E00062 scaffold_5 + View
Erythranthe guttata Migut.L01222 scaffold_12 + View
Eutrema salsugineum Thhalv10004578m.g PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) scaffold_6 + View
Eutrema salsugineum Thhalv10018352m.g PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED scaffold_9 - View
Fragaria x ananassa FAN07G2980 PF00650//PF01661//PF02151//PF08755 - CRAL/TRIO domain (CRAL_TRIO) // Macro domain (Macro) // UvrB/uvrC motif (UVR) // Hemimethylated DNA-binding protein YccV like (YccV-like) Fvb4-4 - View
Fragaria x ananassa FAN22G1596 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN17G2010 PF02151//PF08755 - UvrB/uvrC motif (UVR) // Hemimethylated DNA-binding protein YccV like (YccV-like) Fvb4-2 - View
Fragaria x ananassa FAN12G0082 PF02151//PF08755 - UvrB/uvrC motif (UVR) // Hemimethylated DNA-binding protein YccV like (YccV-like) Fvb4-3 - View
Fragaria vesca FvH4_4g30490 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.D05G306000 PF01661//PF13716 - Macro domain (Macro) // Divergent CRAL/TRIO domain (CRAL_TRIO_2) D05 - View
Gossypium hirsutum Gohir.A05G306000 PF01661//PF13716 - Macro domain (Macro) // Divergent CRAL/TRIO domain (CRAL_TRIO_2) A05 - View
Gossypium hirsutum Gohir.A13G080000 PF00650//PF01661//PF13716 - CRAL/TRIO domain (CRAL_TRIO) // Macro domain (Macro) // Divergent CRAL/TRIO domain (CRAL_TRIO_2) A13 + View
Gossypium hirsutum Gohir.D13G079700 PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) D13 - View
Glycine max Glyma.20G027400 PF01661//PF13716 - Macro domain (Macro) // Divergent CRAL/TRIO domain (CRAL_TRIO_2) Gm20 + View
Glycine max Glyma.01G054950 PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) Gm01 - View
Glycine max Glyma.07G226267 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Gm07 - View
Glycine max Glyma.02G113500 PF02151//PF08755 - UvrB/uvrC motif (UVR) // Hemimethylated DNA-binding protein YccV like (YccV-like) Gm02 - View
Gossypium raimondii Gorai.013G091200 Chr13 - View
Gossypium raimondii Gorai.009G326000 Chr09 - View
Helianthus annuus HanXRQChr17g0545451 Probable ganglioside-induced differentiation-associated protein 2 HanXRQChr17 - View
Hydrangea macrophylla Hma1.2p1_0357F.1_g134430 Hma1.2p1_0357F.1 - View
Lupinus albus Lalb_Chr17g0340981 PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) Lalb_Chr17 - View
Lupinus albus Lalb_Chr16g0385621 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Lalb_Chr16 - View
Lotus japonicus Lj2g0021077 PF02151//PF08755 - UvrB/uvrC motif (UVR) // Hemimethylated DNA-binding protein YccV like (YccV-like) chr2 - View
Lonicera japonica Lj3A1032T69 GWHAAZE00000003 + View
Lonicera japonica Lj6A782G109 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_3_56320 Lsat_1_v8_lg_3 - View
Malus domestica MD16G1064800 appr-1-p processing enzyme family protein Chr16 + View
Malus domestica MD13G1066000 appr-1-p processing enzyme family protein Chr13 + View
Manihot esculenta Manes.05G107600 Chromosome05 - View
Manihot esculenta Manes.01G030200 Chromosome01 + View
Medicago truncatula Medtr4g082640 appr-1-P processing enzyme family protein chr4 - View
Medicago truncatula Medtr5g043480 UvrB/uvrC domain protein chr5 - View
Nicotiana tabacum Nitab4.5_0000334g0260 Hemimethylated DNA-binding domain, UVR domain Nitab4.5_0000334 - View
Nicotiana tabacum Nitab4.5_0000014g0270 CRAL-TRIO domain, Macro domain Nitab4.5_0000014 - View
Olea europaea Oeu021096.1 chr8 - View
Punica granatum PGR119G0925 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NC_045132.1 - View
Punica granatum PGR102G0166 NC_045129.1 - View
Prunus persica Prupe.1G282000 PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) Pp01 - View
Papaver somniferum PSO017G1201 NC_039362.1 - View
Populus trichocarpa Potri.008G093100 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Chr08 - View
Populus trichocarpa Potri.010G161500 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Chr10 + View
Phaseolus vulgaris Phvul.002G167900 PTHR11106//PTHR11106:SF65 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Chr02 - View
Quercus lobata QL03p070830 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0438861 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0076600 chr12 + View
Striga asiatica SGA_v2.0_scaffold16G07752 scaffold16 - View
Salvia bowleyana SalBow8G0328 GWHASIU00000004 - View
Salix brachista Sabra10G0122900 GWHAAZH00000010 + View
Salix brachista Sabra08G0069900 GWHAAZH00000008 - View
Simmondsia chinensis Sc11g0002270 GWHAASQ00000011 - View
Solanum lycopersicum Solyc05g012610.3 Appr-1-p processing enzyme family protein (AHRD V3.3 *** A0A2U1M8F6_ARTAN) SL4.0ch05 + View
Solanum lycopersicum Solyc04g005490.3 Appr-1-p processing enzyme family protein (AHRD V3.3 *** A0A2U1M8F6_ARTAN) SL4.0ch04 + View
Solanum pennellii Sopen05g007440 appr-1-p processing enzyme family protein | CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal , Appr-1-p processing | BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein Spenn-ch05 + View
Solanum pennellii Sopen04g001510 appr-1-p processing enzyme family protein | CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal , Appr-1-p processing | BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400002818 Ganglioside induced differentiation associated protein ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG401028329 DNA binding protein ST4.03ch05 - View
Theobroma cacao Thecc.02G336400 Appr-1-p processing enzyme family protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104805183 uncharacterized protein LOC104805183 NW_010961290.1 - View
Tarenaya hassleriana THA.LOC104808588 protein GDAP2 homolog NW_010960187.1 + View
Trifolium pratense TPR.G34090 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI79G0696 NC_052238.1 + View
Tripterygium wilfordii TWI75G1795 NC_052253.1 + View
Utricularia gibba unitig_26.g10292 unitig_26 + View
Vaccinium macrocarpon vmacro01329 Similar to gdap2: Protein GDAP2 homolog (Nematostella vectensis OX%3D45351) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2584 CM024074.1 - View
Vigna mungo VMungo0251G1052 CM024069.1 - View