Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 9.5e-184 646.7 332 100.0
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 2.5e-168 595.5 332 92.5
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 2.5e-168 595.5 332 92.2
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 5.2e-166 587.8 334 92.2
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.5e-165 586.3 334 91.9
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 4.4e-165 584.7 333 91.0
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 1.3e-164 583.2 334 91.6
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 3.7e-164 581.6 334 91.3
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 5.0e-161 571.2 334 88.6
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 5.0e-161 571.2 334 88.6
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.5e-160 569.7 334 87.7
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 2.5e-160 568.9 333 89.2
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 5.1e-153 544.7 345 82.9
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.5e-141 506.5 335 79.7
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 1.5e-133 479.9 287 89.5
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.0e-121 440.7 332 71.1
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.5e-120 436.8 339 69.6
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 9.6e-120 434.1 333 71.5
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.3e-119 433.7 339 69.6
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 1.6e-119 433.3 339 69.6
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 3.1e-118 429.1 336 69.0
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 6.9e-118 427.9 334 68.9
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 1.5e-117 426.8 335 69.3
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 2.6e-117 426.0 337 68.2
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 5.8e-117 424.9 340 68.8
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 5.8e-117 424.9 343 65.3
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 3.8e-116 422.2 334 68.3
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 3.8e-116 422.2 337 68.8
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 4.9e-116 421.8 343 67.3
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 6.5e-116 421.4 340 66.8
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 8.4e-116 421.0 336 67.0
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 1.1e-115 420.6 336 67.3
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 3.2e-115 419.1 339 66.7
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 3.2e-115 419.1 331 66.8
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 3.2e-115 419.1 331 66.8
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 4.2e-115 418.7 277 75.8
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 7.1e-115 417.9 338 68.0
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.2e-114 417.2 337 65.9
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 2.1e-114 416.4 334 66.2
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 3.5e-114 415.6 272 75.7
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 6.0e-114 414.8 335 68.4
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 1.3e-113 413.7 335 67.2
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 2.3e-113 412.9 341 63.6
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.3e-113 412.9 334 67.1
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 3.0e-113 412.5 333 65.8
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 5.1e-113 411.8 281 73.0
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 6.7e-113 411.4 333 64.6
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 8.7e-113 411.0 340 64.1
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.5e-112 409.5 345 65.5
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 2.5e-112 409.5 325 65.8
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 3.3e-112 409.1 340 63.5
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 5.7e-112 408.3 271 75.3
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 7.4e-112 407.9 344 64.8
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 3.7e-111 405.6 271 76.0
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 4.8e-111 405.2 329 65.7
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 8.2e-111 404.4 343 63.8
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.4e-110 403.7 270 73.7
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 4.1e-110 402.1 334 65.9
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 5.3e-110 401.7 377 59.7
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 1.5e-109 400.2 343 62.7
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 2.6e-109 399.4 337 63.5
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 1.0e-108 397.5 325 64.0
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.3e-108 397.1 343 62.4
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.8e-108 395.6 334 65.9
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 6.5e-108 394.8 310 68.4
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 6.5e-108 394.8 329 65.7
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 1.9e-107 393.3 340 62.4
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 9.3e-107 391.0 296 70.9
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 2.1e-106 389.8 373 59.0
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 3.6e-106 389.0 266 74.4
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 4.6e-106 388.7 333 64.0
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 1.3e-105 387.1 266 74.1
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 3.9e-105 385.6 271 72.3
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 1.5e-104 383.6 296 65.5
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 6.3e-103 378.3 342 61.1
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 1.8e-102 376.7 354 59.9
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.8e-102 376.7 337 60.8
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 4.1e-102 375.6 348 61.5
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 5.3e-102 375.2 366 57.1
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 9.1e-102 374.4 303 63.7
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 1.7e-100 370.2 308 62.7
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 6.5e-100 368.2 294 65.6
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 7.2e-99 364.8 343 58.9
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.4e-97 360.5 280 66.4
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 5.7e-96 355.1 338 62.1
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 6.9e-94 348.2 335 58.5
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 2.0e-93 346.7 272 63.2
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 3.8e-92 342.4 219 79.5
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 1.9e-91 340.1 271 63.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 1.6e-90 337.0 288 66.7
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 8.0e-90 334.7 348 55.2
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 1.4e-89 334.0 287 62.0
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 6.3e-87 325.1 277 66.8
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 5.3e-86 322.0 234 70.1
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.7e-84 317.0 274 64.2
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 4.2e-83 312.4 248 61.3
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 1.6e-82 310.5 274 61.7
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 2.7e-82 309.7 252 60.3
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 2.7e-82 309.7 270 59.3
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 5.0e-76 288.9 284 52.1
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 2.7e-69 266.5 230 66.5
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 9.5e-67 258.1 285 50.9
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 1.0e-65 254.6 224 62.9
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 5.7e-64 248.8 217 56.7
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 3.7e-63 246.1 259 50.2
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.4e-62 244.2 156 80.8
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 4.1e-62 242.7 202 71.3
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.3e-55 221.1 218 62.4
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 1.3e-55 221.1 154 78.6
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 6.6e-52 208.8 153 73.2
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 1.5e-51 207.6 153 73.2
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.9e-46 190.7 232 47.4
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 4.1e-46 189.5 156 64.7
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 1.9e-43 180.6 266 40.6
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 8.3e-39 165.2 254 35.8
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 1.6e-18 97.8 184 35.3
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 1.6e-18 97.8 58 77.6
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 8.4e-15 85.5 63 61.9
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 2.1e-10 70.9 46 69.6
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 1.7e-07 61.2 59 55.9
Cfa025736 Carpinus fangiana HOM05D020303 ORTHO05D021299 4.9e-07 59.7 70 38.6


User provided reference genes

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