Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen06g032200 C2H2-type zinc finger family protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein Spenn-ch06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G15190 LG-4 - View
Aethionema arabicum Aa31sc23G150 sc-23 - View
Acer truncatum Atru.chr12.519 chr12 - View
Acer truncatum Atru.chr3.3824 chr3 + View
Arabidopsis lyrata AL8G36370 scaffold_8 + View
Arabidopsis lyrata AL5G24780 scaffold_5 - View
Aquilegia oxysepala Aqoxy4G03000 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CA07B7 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LRXS7M PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT5G59820 C2H2-type zinc finger family protein Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes%2C including CBF genes. Also%2C lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene%2C the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. RESPONSIVE TO HIGH LIGHT 41 (RHL41)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: in 11 processes%3B LOCATED IN: intracellular%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G46080.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G46070 C2H2-type zinc finger family protein C2H2-type zinc finger family protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: root%2C flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G46080.1)%3B Has 1082 Blast hits to 1044 proteins in 100 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 308%3B Fungi - 0%3B Plants - 765%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC04g19637 ChrC04 + View
Brassica carinata BcaC01g01937 ChrC01 + View
Brassica carinata BcaB08g36217 ChrB08 - View
Brassica carinata BcaC02g08144 ChrC02 - View
Brassica carinata BcaB01g01045 ChrB01 + View
Brassica napus A02p06820 A02 - View
Brassica napus C04p57890 C04 + View
Brassica napus C02p12110 C02 - View
Brassica napus A04p21780 A04 + View
Brassica napus C03p13270 C03 - View
Brassica oleracea BolC9t58101H C9 + View
Brassica oleracea BolC2t07310H C2 - View
Brassica oleracea BolC3t19297H C3 - View
Brassica rapa BraA10t43788Z A10 + View
Brassica rapa BraA04t17744Z A04 + View
Brassica rapa BraA02t05760Z A02 - View
Brassica rapa BraA06t25196Z A06 + View
Beta vulgaris EL10Ac7g15966 PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0043227 putative cold-inducible protein [Camellia sinensis] Contig991 + View
Camellia sinensis var. sinensis CSS0043600 putative cold-inducible protein [Camellia sinensis] Chr4 - View
Camellia sinensis var. sinensis CSS0024322 putative cold-inducible protein [Camellia sinensis] Chr11 + View
Capsicum annuum CAN.G420.4 PGAv.1.6.scaffold420 + View
Capsicum annuum CAN.G755.1 PGAv.1.6.scaffold755 + View
Corylus avellana Haze_24034 Similar to ZAT11: Zinc finger protein ZAT11 (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g12320 Putative Zinc finger protein ZAT11 chr1 + View
Citrus clementina Ciclev10029464m.g scaffold_8 + View
Carpinus fangiana Cfa011449 Cfa04 + View
Cardamine hirsuta CARHR273400 Zinc finger family protein Chr8 + View
Cardamine hirsuta CARHR154430 Zinc finger family protein Chr5 - View
Carya illinoinensis CiPaw.13G099200 PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Chr13 - View
Carya illinoinensis CiPaw.14G072200 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Chr14 - View
Citrullus lanatus ClCG02G020420 Zinc finger family protein CG_Chr02 - View
Citrullus lanatus ClCG03G001900 Zinc finger protein CG_Chr03 + View
Cucumis melo MELO3C020703.2 zinc finger protein ZAT12-like chr12 + View
Cucumis melo MELO3C013679.2 zinc finger protein ZAT11 chr11 + View
Corchorus olitorius COL.COLO4_18452 Zinc finger%2C C2H2-like protein AWUE01016463.1 + View
Carica papaya Cpa.g.sc190.30 supercontig_190 - View
Chenopodium quinoa AUR62009622 ZAT12: Zinc finger protein ZAT12 C_Quinoa_Scaffold_2493 - View
Chenopodium quinoa AUR62001834 ZAT12: Zinc finger protein ZAT12 C_Quinoa_Scaffold_2716 - View
Capsella rubella Carub.0008s2048 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED scaffold_8 + View
Capsella rubella Carub.0004s0973 PF13912 - C2H2-type zinc finger (zf-C2H2_6) scaffold_4 + View
Capsella rubella Carub.0005s1192 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_6G022190 zinc finger protein ZAT11 chr6 + View
Daucus carota DCAR_018887 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv06147 GWHABJS00000007 + View
Davidia involucrata Dinv32851 GWHABJS00000010 + View
Durio zibethinus Duzib168G0948 NW_019168159.1 - View
Durio zibethinus Duzib170G1045 NW_019167871.1 - View
Durio zibethinus Duzib150G0324 NW_019167882.1 + View
Erigeron canadensis ECA248G3010 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA236G4275 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.A01233 Chr01 - View
Eutrema salsugineum Thhalv10014884m.g PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED scaffold_2 - View
Eutrema salsugineum Thhalv10002839m.g PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED scaffold_4 + View
Fragaria x ananassa FAN16G3126 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Fvb3-3 + View
Fragaria x ananassa FAN11G3905 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Fvb3-4 + View
Fragaria x ananassa FAN21G1866 PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Fvb3-2 + View
Fragaria x ananassa FAN25G2021 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Fvb3-1 - View
Fragaria vesca FvH4_3g35020 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Fvb3 + View
Gossypium hirsutum Gohir.A13G228800 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED A13 - View
Glycine max Glyma.10G045200 PTHR26374//PTHR26374:SF198 - FAMILY NOT NAMED // ZINC FINGER PROTEIN ZAT11 Gm10 - View
Glycine max Glyma.11G142500 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Gm11 - View
Glycine max Glyma.15G040700 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Gm15 - View
Gossypium raimondii Gorai.013G265200 Chr13 - View
Helianthus annuus HanXRQChr06g0175911 Putative zinc finger, C2H2-like HanXRQChr06 - View
Helianthus annuus HanXRQChr01g0009791 Probable C2H2-type zinc finger family protein HanXRQChr01 - View
Hydrangea macrophylla Hma1.2p1_0624F.1_g191230 Hma1.2p1_0624F.1 + View
Lupinus albus Lalb_Chr14g0375001 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Lalb_Chr14 + View
Lotus japonicus Lj5g0013153 PTHR26374//PTHR26374:SF198 - FAMILY NOT NAMED // ZINC FINGER PROTEIN ZAT11 chr5 + View
Lotus japonicus Lj3g0018833 PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED chr3 - View
Lonicera japonica Lj1C158T10 GWHAAZE00000001 - View
Lonicera japonica Lj2C1056T1 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_77560 Lsat_1_v8_lg_8 - View
Malus domestica MD11G1113200 C2H2-type zinc finger family protein Chr11 - View
Malus domestica MD03G1099300 C2H2-type zinc finger family protein Chr03 - View
Manihot esculenta Manes.04G031100 Chromosome04 + View
Manihot esculenta Manes.07G111900 Chromosome07 + View
Medicago truncatula Medtr2g096540 C2H2 type zinc finger transcription factor family protein, putative chr2 + View
Nicotiana tabacum Nitab4.5_0000766g0080 Zinc finger, C2H2-like, Zinc finger C2H2-type/integrase DNA-binding domain, Zinc finger, C2H2 Nitab4.5_0000766 + View
Oryza sativa ssp. japonica Os05g0460900 Hypothetical conserved gene. chr05 - View
Oryza sativa ssp. japonica Os01g0838600 Zinc finger, C2H2-like domain containing protein. chr01 - View
Oryza sativa ssp. japonica Os03g0279700 Similar to ZPT2-12. chr03 - View
Petunia axillaris Peaxi162Scf00411g00026 C2H2-type zinc finger family protein Peaxi162Scf00411 - View
Punica granatum PGR119G2569 NC_045132.1 + View
Punica granatum PGR102G1435 NC_045129.1 + View
Prunus persica Prupe.6G084100 PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Pp06 - View
Populus trichocarpa Potri.001G235800 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Chr01 + View
Populus trichocarpa Potri.009G027700 PTHR26374//PTHR26374:SF162 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Chr09 + View
Quercus lobata QL01p033185 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0062941 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0086500 chr13 - View
Salix brachista Sabra09G0018900 GWHAAZH00000009 + View
Salix brachista Sabra16G0141900 GWHAAZH00000016 + View
Sechium edule Sed0017739 LG01 - View
Sechium edule Sed0010296 LG05 + View
Solanum lycopersicum Solyc06g075775.1 Zinc finger protein ZAT12 (AHRD V3.3 *** A0A2G3CB25_CAPCH) SL4.0ch06 + View
Solanum lycopersicum Solyc11g073055.1 Zinc finger protein ZAT11 (AHRD V3.3 *-* A0A1J3JX49_NOCCA) SL4.0ch11 - View
Schrenkiella parvula Sp5g15530 PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED ch5-1 + View
Schrenkiella parvula Sp6g21500 PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED ch6-6 + View
Solanum tuberosum PGSC0003DMG400015557 ZPT2-13 ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400030311 ZPT2-8 ST4.03ch06 + View
Trochodendron aralioides TAR623G1779 group7 + View
Theobroma cacao Thecc.09G327400 C2H2 and C2HC zinc fingers superfamily protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104811281 zinc finger protein ZAT12 NW_010965304.1 + View
Trifolium pratense TPR.G34258 Tp57577_TGAC_v2_LG7 + View
Trifolium pratense TPR.G1055 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI31G0028 NC_052233.1 - View
Vaccinium macrocarpon vmacro03110 Similar to ZAT8: Zinc finger protein ZAT8 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2199 CM024070.1 - View
Vigna mungo VMungo1080G0578 CM024079.1 - View
Zea mays Zm00001eb266420 Zm00001e029605 ZFP16-1 6 + View