Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen09g002250 40S ribosomal protein S23 (S12) - Fragaria ananassa (Strawberry), Ribosomal protein S12/S23 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome | EXPRESSED IN: guard cell, leaf | CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal , Ribosomal protein S12/S23 , Nucleic acid-binding, OB-fold-like , Nucleic acid-binding, OB-fold | BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein Spenn-ch09 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G12370 LG-1 - View
Acer truncatum Atru.chr12.639 chr12 + View
Acer truncatum Atru.chr3.3716 chr3 + View
Acer truncatum Atru.chr8.2557 chr8 - View
Actinidia chinensis Actinidia03751 Lachesis_group9 + View
Actinidia chinensis Actinidia07108 Lachesis_group13 - View
Arabidopsis lyrata AL8G36820 scaffold_8 - View
Avicennia marina MSTRG.21148 ScioBoG_26769_HRSCAF_26899 + View
Amaranthus hybridus Ah.01g014890 Interactor of constitutive active ROPs 3 (ROP-interactive partner 5) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy2G01872 CHR02 + View
Aquilegia oxysepala Aqoxy4G03195 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X9H47S KOG1937 - Uncharacterized conserved protein arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C0K4NA KOG1937 - Uncharacterized conserved protein arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AAN9CD arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3WQI06 arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G3522P arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT5G60210 ROP interactive partner 5 Encodes RIP5 (ROP interactive partner 5)%2C a putative Rho protein effector%2C interacting specifically with the active form of ROPs (Rho proteins of plants). ROP interactive partner 5 (RIP5)%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B BEST Arabidopsis thaliana protein match is: ROP interactive partner 3 (TAIR:AT2G37080.1)%3B Has 98994 Blast hits to 51471 proteins in 2911 species: Archae - 1324%3B Bacteria - 16057%3B Metazoa - 45939%3B Fungi - 8665%3B Plants - 5713%3B Viruses - 271%3B Other Eukaryotes - 21025 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G02960 Ribosomal protein S12/S23 family protein Ribosomal protein S12/S23 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C cytosolic ribosome%2C ribosome%3B EXPRESSED IN: guard cell%2C leaf%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S23%2C eukaryotic/archaeal (InterPro:IPR005680)%2C Ribosomal protein S12/S23 (InterPro:IPR006032)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1)%3B Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259%3B Bacteria - 5125%3B Metazoa - 487%3B Fungi - 294%3B Plants - 977%3B Viruses - 0%3B Other Eukaryotes - 1932 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB05g22628 ChrB05 - View
Brassica napus A02p06550 A02 + View
Brassica napus C02p11840 C02 + View
Brassica oleracea BolC2t07278H C2 + View
Brassica oleracea BolC3t13763H C3 + View
Brassica rapa BraA02t05738Z A02 + View
Brassica rapa BraA03t10441Z A03 + View
Beta vulgaris EL10Ac9g22420 Chr9_EL10_PGA_scaffold8 - View
Camellia sinensis var. sinensis CSS0026079 hypothetical protein L484_014428 [Morus notabilis] Chr4 + View
Cannabis sativa CANSAT54G0448 NC_044375.1 - View
Corylus avellana Haze_20647 Similar to ICR2: Interactor of constitutive active ROPs 2, chloroplastic (Arabidopsis thaliana OX%3D3702) 10 + View
Corylus avellana Haze_23938 Similar to ICR3: Interactor of constitutive active ROPs 3 (Arabidopsis thaliana OX%3D3702) 6 + View
Corylus avellana Haze_16936 Similar to RPS23: 40S ribosomal protein S23 (Fragaria ananassa OX%3D3747) 11 + View
Coffea canephora Cc01_g11650 Putative Interactor of constitutive active ROPs 3 chr1 + View
Citrus clementina Ciclev10027972m.g scaffold_8 + View
Ceratophyllum demersum CDE09G1283 7 + View
Ceratophyllum demersum CDE02G3314 1 - View
Carpinus fangiana Cfa001594 Cfa01 - View
Carpinus fangiana Cfa011374 Cfa04 + View
Cardamine hirsuta CARHR273890 Interactor of constitutive active ROPs 3 Chr8 - View
Carya illinoinensis CiPaw.09G179900 Chr09 + View
Carya illinoinensis CiPaw.14G077200 Chr14 - View
Carya illinoinensis CiPaw.13G106000 Chr13 - View
Carya illinoinensis CiPaw.01G276600 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Chr01 + View
Citrullus lanatus ClCG03G002420 Interactor of constitutive active ROPs CG_Chr03 + View
Citrullus lanatus ClCG02G020860 40S ribosomal protein S23 CG_Chr02 - View
Cucumis melo MELO3C005002.2 Interactor of constitutive active ROPs-like protein chr12 + View
Cucumis melo MELO3C025738.2 Ribosomal protein S12 chr11 - View
Chenopodium quinoa AUR62025028 ICR3: Interactor of constitutive active ROPs 3 C_Quinoa_Scaffold_4082 + View
Chenopodium quinoa AUR62006504 ICR3: Interactor of constitutive active ROPs 3 C_Quinoa_Scaffold_3429 - View
Capsella rubella Carub.0006s0176 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) scaffold_6 - View
Capsella rubella Carub.0008s2096 scaffold_8 - View
Cucumis sativus L. CsaV3_3G035560 Ribosomal protein S23 chr3 - View
Cucumis sativus L. CsaV3_6G021530 Ribosomal protein S23 chr6 - View
Daucus carota DCAR_006038 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv32802 GWHABJS00000010 + View
Davidia involucrata Dinv37254 GWHABJS00000021 + View
Davidia involucrata Dinv35710 GWHABJS00000015 - View
Durio zibethinus Duzib150G1393 NW_019167882.1 - View
Durio zibethinus Duzib093G0204 NW_019167937.1 + View
Durio zibethinus Duzib168G0376 NW_019168159.1 - View
Durio zibethinus Duzib128G0466 NW_019168481.1 + View
Durio zibethinus Duzib170G0124 NW_019167871.1 + View
Erigeron canadensis ECA233G5130 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.B02460 Chr02 - View
Erythranthe guttata Migut.N02628 scaffold_14 + View
Eutrema salsugineum Thhalv10015878m.g KOG0993 - Rab5 GTPase effector Rabaptin-5 scaffold_2 + View
Fragaria x ananassa FAN09G4646 KOG4593 - Mitotic checkpoint protein MAD1 Fvb6-2 + View
Fragaria x ananassa FAN16G2424 KOG0963 - Transcription factor/CCAAT displacement protein CDP1 Fvb3-3 + View
Fragaria x ananassa FAN25G0821 Fvb3-1 + View
Fragaria x ananassa FAN11G3675 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Fvb3-4 - View
Fragaria x ananassa FAN21G1957 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Fvb3-2 - View
Fragaria vesca FvH4_3g33632 KOG0963//KOG0978 - Transcription factor/CCAAT displacement protein CDP1 // E3 ubiquitin ligase involved in syntaxin degradation Fvb3 + View
Gossypium hirsutum Gohir.D09G102400 D09 - View
Gossypium hirsutum Gohir.A09G105600 A09 - View
Gossypium hirsutum Gohir.D01G205700 D01 + View
Gossypium hirsutum Gohir.A01G217000 A01 + View
Glycine max Glyma.03G178000 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Gm03 - View
Glycine max Glyma.15G044900 Gm15 - View
Glycine max Glyma.13G137100 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Gm13 - View
Glycine max Glyma.19G178800 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Gm19 - View
Glycine max Glyma.13G328900 Gm13 + View
Glycine max Glyma.12G072200 Gm12 + View
Glycine max Glyma.11G151706 PTHR11652:SF16 - 40S RIBOSOMAL PROTEIN S23-1 Gm11 - View
Glycine max Glyma.10G049400 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Gm10 - View
Gossypium raimondii Gorai.002G250100 Chr02 + View
Gossypium raimondii Gorai.006G121200 Chr06 + View
Lupinus albus Lalb_Chr19g0137441 Lalb_Chr19 + View
Lupinus albus Lalb_Chr14g0374821 Lalb_Chr14 + View
Lupinus albus Lalb_Chr01g0004121 Lalb_Chr01 - View
Lupinus albus Lalb_Chr03g0027061 Lalb_Chr03 - View
Lotus japonicus Lj5g0006568 chr5 + View
Lotus japonicus Lj3g0027820 chr3 - View
Lotus japonicus Lj3g0023755 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) chr3 - View
Lotus japonicus Lj1g0024319 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) chr1 + View
Lonicera japonica Lj1A183T51 GWHAAZE00000001 - View
Lonicera japonica Lj2C1038G2 GWHAAZE00000002 + View
Lonicera japonica Lj3C979G16 GWHAAZE00000003 - View
Lonicera japonica Lj2A107T63 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_6_24000 Lsat_1_v8_lg_6 - View
Malus domestica MD07G1179600 Ribosomal protein S12/S23 family protein Chr07 - View
Malus domestica MD11G1123500 Ribosomal protein S12/S23 family protein Chr11 - View
Malus domestica MD03G1110100 Ribosomal protein S12/S23 family protein Chr03 - View
Manihot esculenta Manes.11G140400 Chromosome11 - View
Manihot esculenta Manes.10G042200 Chromosome10 - View
Manihot esculenta Manes.07G101800 Chromosome07 - View
Manihot esculenta Manes.04G026300 Chromosome04 + View
Medicago truncatula Medtr2g093240 interactor of constitutive active ROPs protein, putative chr2 - View
Medicago truncatula Medtr7g100720 40S ribosomal protein S23-1 chr7 - View
Medicago truncatula Medtr4g461060 interactor of constitutive active ROPs-like protein chr4 + View
Nelumbo nucifera Nn2g12995 chr2 - View
Nelumbo nucifera Nn2g10659 chr2 - View
Nicotiana tabacum Nitab4.5_0000022g0240 Ribosomal protein S12/S23, Nucleic acid-binding, OB-fold, Ribosomal protein S23, eukaryotic/archaeal Nitab4.5_0000022 + View
Nicotiana tabacum Nitab4.5_0000888g0210 Unknown Nitab4.5_0000888 - View
Olea europaea Oeu038947.1 chr20 - View
Olea europaea Oeu005919.3 chr4 + View
Oryza sativa ssp. japonica Os05g0122600 Similar to Rid2 protein (Fragment). Prefoldin domain containing protein. chr05 + View
Punica granatum PGR102G2478 NC_045129.1 - View
Punica granatum PGR044G0081 NC_045134.1 + View
Punica granatum PGR004G0336 NC_045131.1 + View
Prunus persica Prupe.6G241200 Pp06 + View
Prunus persica Prupe.6G092700 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Pp06 - View
Pisum sativum Psat7g222360 Unknown gene chr7LG7 - View
Pisum sativum Psat5g277040 Unknown gene chr5LG3 - View
Papaver somniferum PSO063G3058 NC_039364.1 + View
Papaver somniferum PSO339G6671 NC_039366.1 + View
Papaver somniferum PSO384G3662 NC_039368.1 + View
Populus trichocarpa Potri.010G217100 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Chr10 - View
Populus trichocarpa Potri.016G085800 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Chr16 - View
Populus trichocarpa Potri.008G044400 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Chr08 + View
Phaseolus vulgaris Phvul.011G072000 Chr11 - View
Phaseolus vulgaris Phvul.001G174900 K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Chr01 - View
Phaseolus vulgaris Phvul.005G137600 Chr05 + View
Quercus lobata QL08p056850 8 + View
Quercus lobata QL07p045248 7 + View
Quercus lobata QL01p036649 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0061061 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim01G0220900 chr01 + View
Rhododendron simsii RhsimUnG0117900 ctg309 + View
Salvia bowleyana SalBow3G2191 GWHASIU00000006 + View
Salvia bowleyana SalBow3G2047 GWHASIU00000006 - View
Salix brachista Sabra10G0168000 GWHAAZH00000010 - View
Salix brachista Sabra08G0030700 GWHAAZH00000008 + View
Salix brachista Sabra16G0092300 GWHAAZH00000016 - View
Simmondsia chinensis Sc21g0000010 GWHAASQ00000021 - View
Sechium edule Sed0016366 LG01 - View
Sechium edule Sed0005305 LG05 + View
Solanum lycopersicum Solyc11g072490.2 Interactor of constitutive active ROPs-like protein (AHRD V3.3 *** A0A2K3N4K9_TRIPR) SL4.0ch11 + View
Solanum lycopersicum Solyc09g007350.3 Ribosomal protein S23 (AHRD V3.3 *** A8IJQ4_CHLRE) SL4.0ch09 - View
Schrenkiella parvula Sp6g21840 ch6-6 - View
Solanum tuberosum PGSC0003DMG400010469 40S ribosomal protein S23 ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400025398 40S ribosomal protein S23 ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400025371 Myosin heavy chain ST4.03ch11 + View
Trochodendron aralioides TAR369G0328 group18 - View
Trochodendron aralioides TAR633G0231 group2 - View
Trochodendron aralioides TAR623G0803 group7 + View
Trochodendron aralioides TAR636G1469 group1 + View
Theobroma cacao Thecc.09G261500 ROP interactive partner 5 Chromosome_9 + View
Theobroma cacao Thecc.10G068100 Ribosomal protein S12/S23 family protein Chromosome_10 + View
Trifolium pratense TPR.G2981 Tp57577_TGAC_v2_LG4 + View
Trifolium pratense TPR.G11500 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI79G0235 NC_052238.1 - View
Tripterygium wilfordii TWI31G1142 NC_052233.1 - View
Vaccinium macrocarpon vmacro14472 Similar to ICR3: Interactor of constitutive active ROPs 3 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20057 Similar to ICR2: Interactor of constitutive active ROPs 2, chloroplastic (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0217 CM024079.1 - View
Vigna mungo VMungo1127G0512 CM024076.1 - View
Vigna mungo VMungo1383G2025 CM024070.1 - View
Vitis vinifera GSVIVG01025121001 chr6 + View