Gene: AT5G02960

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G02960
  • Transcript Identifier AT5G02960.1
  • Gene Type Coding gene
  • Location Chr5 : 693280-694396 : negative

Gene Family Information

  • ID HOM05D000666
  • #Genes/#Species 858/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G02960.1
  • uniprot P49201

Descriptions

  • Description Ribosomal protein S12/S23 family protein
  • Computational description Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IBA
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IBA
Gene Ontologyribosome1
GO:0005840
IEA
InterProribosome
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome3
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 4
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0005794
RCA
Gene OntologyGolgi apparatus6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006032 Ribosomal protein S12/S23
IPR005680 Ribosomal protein S23, eukaryotic/archaeal
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
17.1.3.1.24 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS23