Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Sopen04g020860 | ATRX | FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain , SNF2-related | BEST Arabidopsis thaliana protein match is: homolog of RAD54 ., SNF2-related, Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) | Spenn-ch04 | - | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia16312 | Lachesis_group24 | + | View | |
Actinidia chinensis | Actinidia06888 | Lachesis_group13 | + | View | |
Avicennia marina | MSTRG.16362 | ScioBoG_19538_HRSCAF_19626 | + | View | |
Camellia sinensis var. sinensis | CSS0040868 | PREDICTED: chromatin structure-remodeling complex protein SYD [Sesamum indicum] | Chr11 | - | View |
Cannabis sativa | CANSAT54G2768 | NC_044375.1 | - | View | |
Cardamine hirsuta | CARHR034800 | Chromatin-remodeling protein 11 | Chr1 | + | View |
Davidia involucrata | Dinv08033 | GWHABJS00000003 | + | View | |
Erigeron canadensis | ECA246G5074 | Conyza_canadensis_scaffold:8 | + | View | |
Erythranthe guttata | Migut.D00580 | scaffold_4 | + | View | |
Fragaria x ananassa | FAN11G2466 | K11367 - chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] (CHD1) | Fvb3-4 | + | View |
Gossypium hirsutum | Gohir.D09G107800 | K11367 - chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] (CHD1) | D09 | + | View |
Nicotiana tabacum | Nitab4.5_0000492g0040 | Helicase/SANT-associated, DNA binding, SNF2-related, P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal, Domain of unknown function DUF4283, Helicase, superfamily 1/2, ATP-binding domain | Nitab4.5_0000492 | + | View |
Olea europaea | Oeu007474.1 | scaffold1273 | - | View | |
Petunia axillaris | Peaxi162Scf00029g00307 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | Peaxi162Scf00029 | - | View |
Rhododendron simsii | Rhsim13G0223800 | chr13 | - | View | |
Striga asiatica | SGA_v2.0_scaffold8G04607 | scaffold8 | - | View | |
Solanum lycopersicum | Solyc11g062010.3 | Chromatin structure-remodeling complex protein SYD (AHRD V3.3 *** A0A2G2YFV9_CAPAN) | SL4.0ch11 | + | View |
Theobroma cacao | Thecc.09G243900 | Chromatin remodeling complex subunit | Chromosome_9 | + | View |
Vaccinium macrocarpon | vmacro04191 | Similar to SYD: Chromatin structure-remodeling complex protein SYD (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01037235001 | chr6 | - | View |