Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen10g020500 hypothetical protein Spenn-ch10 - View
Sopen09g011430 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 + View
Sopen07g014510 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 - View
Sopen03g011190 hypothetical protein Spenn-ch03 + View
Sopen03g013400 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch03 + View
Sopen09g015010 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch09 - View
Sopen05g016440 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 - View
Sopen02g008520 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch02 + View
Sopen03g011820 hypothetical protein Spenn-ch03 - View
Sopen01g015620 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen12g016250 hypothetical protein Spenn-ch12 + View
Sopen06g010230 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch06 - View
Sopen05g024150 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 - View
Sopen07g005730 hypothetical protein Spenn-ch07 - View
Sopen10g006460 hypothetical protein Spenn-ch10 - View
Sopen07g016580 hypothetical protein Spenn-ch07 + View
Sopen01g016010 hypothetical protein Spenn-ch01 + View
Sopen06g005190 hypothetical protein Spenn-ch06 + View
Sopen09g012310 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch09 - View
Sopen09g021380 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 + View
Sopen07g013250 hypothetical protein Spenn-ch07 - View
Sopen07g017460 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 + View
Sopen07g013630 hypothetical protein Spenn-ch07 + View
Sopen04g011860 hypothetical protein Spenn-ch04 - View
Sopen01g023890 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch01 + View
Sopen10g026030 hypothetical protein Spenn-ch10 - View
Sopen01g010010 hypothetical protein Spenn-ch01 + View
Sopen02g006410 hypothetical protein Spenn-ch02 + View
Sopen03g016020 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch03 + View
Sopen06g010980 hypothetical protein Spenn-ch06 - View
Sopen08g017240 hypothetical protein Spenn-ch08 - View
Sopen11g012290 hypothetical protein Spenn-ch11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Beta vulgaris EL10Ac6g13991 Chr6_EL10_PGA_scaffold0 - View
Erigeron canadensis ECA232G4145 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA236G1654 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA248G2506 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA238G0624 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA240G1800 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA232G3375 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA248G2549 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA247G3342 Conyza_canadensis_scaffold:7 - View
Manihot esculenta Manes.18G119120 Chromosome18 + View
Papaver somniferum PSO170G4184 NC_039360.1 - View
Papaver somniferum PSO339G2028 NC_039366.1 - View
Populus trichocarpa Potri.013G100901 PTHR31286//PTHR31286:SF2 - FAMILY NOT NAMED // TA11-LIKE NON-LTR RETROELEMENT PROTEIN-RELATED Chr13 - View
Salix brachista Sabra19G0086400 GWHAAZH00000019 - View
Sequoiadendron giganteum SEGI_33835 chr4 + View
Sequoiadendron giganteum SEGI_28460 chr1 + View
Sapria himalayana SHI01870 scaffold3_21451142 + View
Sapria himalayana SHI12494 scaffold11_13529635 + View
Theobroma cacao Thecc.08G176100 Uncharacterized protein Chromosome_8 + View